Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.21□□□□□ -0.13
CX3CL1P78423 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.21□□□□□ -0.13
CX3CL1P78423 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.21□□□□□ -0.13
CX3CL1P78423 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CX3CL1P78423 AC116407.2-201ENST00000613639 860 ntBASIC14.21□□□□□ -0.13
CX3CL1P78423 AC116407.4-201ENST00000623319 1061 ntBASIC14.21□□□□□ -0.13
CX3CL1P78423 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.21□□□□□ -0.13
CX3CL1P78423 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.21□□□□□ -0.13
CX3CL1P78423 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.21□□□□□ -0.13
CX3CL1P78423 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.21□□□□□ -0.13
CX3CL1P78423 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CX3CL1P78423 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CX3CL1P78423 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.21□□□□□ -0.14
CX3CL1P78423 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.21□□□□□ -0.14
CX3CL1P78423 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CX3CL1P78423 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CX3CL1P78423 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CX3CL1P78423 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CX3CL1P78423 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
CX3CL1P78423 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
CX3CL1P78423 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CX3CL1P78423 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.21□□□□□ -0.14
CX3CL1P78423 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CX3CL1P78423 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CX3CL1P78423 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CX3CL1P78423 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CX3CL1P78423 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.2□□□□□ -0.14
CX3CL1P78423 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CX3CL1P78423 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.2□□□□□ -0.14
CX3CL1P78423 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CX3CL1P78423 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 AD000864.1-201ENST00000624076 2295 ntBASIC14.2□□□□□ -0.14
CX3CL1P78423 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 BX276092.5-203ENST00000456199 560 ntBASIC14.2□□□□□ -0.14
CX3CL1P78423 AC112698.1-201ENST00000510299 916 ntBASIC14.2□□□□□ -0.14
CX3CL1P78423 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.2□□□□□ -0.14
CX3CL1P78423 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.2□□□□□ -0.14
CX3CL1P78423 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.2□□□□□ -0.14
CX3CL1P78423 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 AC090616.6-201ENST00000582640 721 ntBASIC14.2□□□□□ -0.14
CX3CL1P78423 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.2□□□□□ -0.14
CX3CL1P78423 AL121672.3-201ENST00000608644 468 ntBASIC14.2□□□□□ -0.14
CX3CL1P78423 IGHV3-41-201ENST00000613121 348 ntBASIC14.2□□□□□ -0.14
CX3CL1P78423 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CX3CL1P78423 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CL1P78423 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 IER3-202ENST00000376377 1350 ntBASIC14.2□□□□□ -0.14
CX3CL1P78423 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CL1P78423 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.19□□□□□ -0.14
CX3CL1P78423 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.19□□□□□ -0.14
CX3CL1P78423 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.19□□□□□ -0.14
CX3CL1P78423 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CX3CL1P78423 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.19□□□□□ -0.14
CX3CL1P78423 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.19□□□□□ -0.14
CX3CL1P78423 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CX3CL1P78423 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
CX3CL1P78423 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.19□□□□□ -0.14
CX3CL1P78423 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.19□□□□□ -0.14
CX3CL1P78423 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.19□□□□□ -0.14
CX3CL1P78423 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.19□□□□□ -0.14
CX3CL1P78423 AC124864.1-201ENST00000623408 392 ntBASIC14.19□□□□□ -0.14
CX3CL1P78423 AL358472.4-201ENST00000633140 710 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms