Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC124864.1-201ENST00000623408 392 ntBASIC18.33■□□□□ 0.52
IRX4P78413 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.33■□□□□ 0.52
IRX4P78413 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.33■□□□□ 0.52
IRX4P78413 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
IRX4P78413 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.33■□□□□ 0.52
IRX4P78413 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.32■□□□□ 0.52
IRX4P78413 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.32■□□□□ 0.52
IRX4P78413 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
IRX4P78413 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.32■□□□□ 0.52
IRX4P78413 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.32■□□□□ 0.52
IRX4P78413 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.32■□□□□ 0.52
IRX4P78413 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.32■□□□□ 0.52
IRX4P78413 RNA5SP419-201ENST00000515908 135 ntBASIC18.32■□□□□ 0.52
IRX4P78413 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
IRX4P78413 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
IRX4P78413 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IRX4P78413 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.32■□□□□ 0.52
IRX4P78413 GPR32P1-201ENST00000601788 811 ntBASIC18.32■□□□□ 0.52
IRX4P78413 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.32■□□□□ 0.52
IRX4P78413 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IRX4P78413 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.32■□□□□ 0.52
IRX4P78413 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX4P78413 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
IRX4P78413 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
IRX4P78413 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.31■□□□□ 0.52
IRX4P78413 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.31■□□□□ 0.52
IRX4P78413 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.31■□□□□ 0.52
IRX4P78413 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
IRX4P78413 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.31■□□□□ 0.52
IRX4P78413 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 TP73-AS1-207ENST00000624167 988 ntBASIC18.31■□□□□ 0.52
IRX4P78413 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.31■□□□□ 0.52
IRX4P78413 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.31■□□□□ 0.52
IRX4P78413 AL109659.2-201ENST00000606809 1674 ntBASIC18.31■□□□□ 0.52
IRX4P78413 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
IRX4P78413 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX4P78413 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.31■□□□□ 0.52
IRX4P78413 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
IRX4P78413 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
IRX4P78413 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
IRX4P78413 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
IRX4P78413 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.3■□□□□ 0.52
IRX4P78413 NUS1P2-201ENST00000417358 873 ntBASIC18.3■□□□□ 0.52
IRX4P78413 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms