Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.78■□□□□ 0.92
CNTNAP1P78357 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.78■□□□□ 0.92
CNTNAP1P78357 ARSEP1-201ENST00000420443 635 ntBASIC20.78■□□□□ 0.92
CNTNAP1P78357 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP1P78357 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP1P78357 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP1P78357 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP1P78357 BX276092.7-203ENST00000637198 1536 ntBASIC20.78■□□□□ 0.92
CNTNAP1P78357 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP1P78357 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP1P78357 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP1P78357 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP1P78357 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 COX5BP8-201ENST00000416911 349 ntBASIC20.77■□□□□ 0.92
CNTNAP1P78357 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 AC025048.6-201ENST00000634326 1161 ntBASIC20.77■□□□□ 0.92
CNTNAP1P78357 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP1P78357 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP1P78357 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP1P78357 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.77■□□□□ 0.92
CNTNAP1P78357 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP1P78357 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNTNAP1P78357 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.77■□□□□ 0.91
CNTNAP1P78357 AC097637.2-201ENST00000624096 1997 ntBASIC20.77■□□□□ 0.91
CNTNAP1P78357 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNTNAP1P78357 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CNTNAP1P78357 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP1P78357 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP1P78357 AL596325.1-201ENST00000563991 1082 ntBASIC20.76■□□□□ 0.91
CNTNAP1P78357 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP1P78357 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP1P78357 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CNTNAP1P78357 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP1P78357 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 LINC00982-205ENST00000420957 435 ntBASIC20.75■□□□□ 0.91
CNTNAP1P78357 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP1P78357 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP1P78357 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.74■□□□□ 0.91
CNTNAP1P78357 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 KLF2P3-201ENST00000451977 1087 ntBASIC20.74■□□□□ 0.91
CNTNAP1P78357 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP1P78357 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CNTNAP1P78357 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms