Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.31■□□□□ 0.2
PER3P56645 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.31■□□□□ 0.2
PER3P56645 KRT18P41-201ENST00000518924 1277 ntBASIC16.31■□□□□ 0.2
PER3P56645 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.31■□□□□ 0.2
PER3P56645 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PER3P56645 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.31■□□□□ 0.2
PER3P56645 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.31■□□□□ 0.2
PER3P56645 AC008687.5-201ENST00000593746 558 ntBASIC16.31■□□□□ 0.2
PER3P56645 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PER3P56645 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.31■□□□□ 0.2
PER3P56645 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PER3P56645 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PER3P56645 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PER3P56645 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PER3P56645 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PER3P56645 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.3■□□□□ 0.2
PER3P56645 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.3■□□□□ 0.2
PER3P56645 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PER3P56645 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PER3P56645 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PER3P56645 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.3■□□□□ 0.2
PER3P56645 AP005901.3-202ENST00000581653 237 ntBASIC16.3■□□□□ 0.2
PER3P56645 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.3■□□□□ 0.2
PER3P56645 CROCCP1-201ENST00000426910 5675 ntBASIC16.3■□□□□ 0.2
PER3P56645 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.3■□□□□ 0.2
PER3P56645 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.3■□□□□ 0.2
PER3P56645 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PER3P56645 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PER3P56645 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.29■□□□□ 0.2
PER3P56645 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 ABALON-201ENST00000629058 1903 ntBASIC16.29■□□□□ 0.2
PER3P56645 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.29■□□□□ 0.2
PER3P56645 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 MIR149-201ENST00000384879 89 ntBASIC16.29■□□□□ 0.2
PER3P56645 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PER3P56645 RBM17P3-201ENST00000417687 1192 ntBASIC16.29■□□□□ 0.2
PER3P56645 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.29■□□□□ 0.2
PER3P56645 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PER3P56645 AL691403.2-201ENST00000618460 490 ntBASIC16.29■□□□□ 0.2
PER3P56645 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.29■□□□□ 0.2
PER3P56645 AC079781.4-201ENST00000641908 219 ntBASIC16.29■□□□□ 0.2
PER3P56645 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PER3P56645 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms