Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDH12P55289 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDH12P55289 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH12P55289 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH12P55289 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH12P55289 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 COX11P1-201ENST00000489116 835 ntBASIC16.4■□□□□ 0.22
CDH12P55289 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 AC113404.2-201ENST00000507884 177 ntBASIC16.4■□□□□ 0.22
CDH12P55289 AL441883.1-201ENST00000566170 1045 ntBASIC16.4■□□□□ 0.22
CDH12P55289 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH12P55289 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 AC024563.2-201ENST00000603282 481 ntBASIC16.4■□□□□ 0.22
CDH12P55289 AC079602.3-201ENST00000623931 403 ntBASIC16.4■□□□□ 0.22
CDH12P55289 AC133561.5-201ENST00000635547 218 ntBASIC16.4■□□□□ 0.22
CDH12P55289 AL031432.5-201ENST00000641059 760 ntBASIC16.4■□□□□ 0.22
CDH12P55289 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH12P55289 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH12P55289 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDH12P55289 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDH12P55289 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 AL118508.1-201ENST00000613502 2345 ntBASIC16.4■□□□□ 0.22
CDH12P55289 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CDH12P55289 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH12P55289 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CDH12P55289 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.39■□□□□ 0.22
CDH12P55289 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
CDH12P55289 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH12P55289 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH12P55289 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.39■□□□□ 0.21
CDH12P55289 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH12P55289 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH12P55289 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH12P55289 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 AL391807.1-203ENST00000604392 2365 ntBASIC16.39■□□□□ 0.21
CDH12P55289 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH12P55289 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CDH12P55289 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH12P55289 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH12P55289 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH12P55289 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH12P55289 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CDH12P55289 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH12P55289 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH12P55289 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH12P55289 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH12P55289 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH12P55289 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDH12P55289 DDX43P3-201ENST00000441064 443 ntBASIC16.38■□□□□ 0.21
CDH12P55289 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH12P55289 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms