Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.84■□□□□ 0.61
VCPP55072 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.84■□□□□ 0.61
VCPP55072 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.84■□□□□ 0.61
VCPP55072 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.84■□□□□ 0.61
VCPP55072 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 IGHV3-22-201ENST00000520721 359 ntBASIC18.84■□□□□ 0.61
VCPP55072 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.84■□□□□ 0.61
VCPP55072 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.84■□□□□ 0.61
VCPP55072 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.84■□□□□ 0.61
VCPP55072 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
VCPP55072 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.84■□□□□ 0.61
VCPP55072 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.84■□□□□ 0.61
VCPP55072 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.84■□□□□ 0.61
VCPP55072 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 LINC01126-201ENST00000623515 1646 ntBASIC18.84■□□□□ 0.61
VCPP55072 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VCPP55072 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VCPP55072 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.84■□□□□ 0.61
VCPP55072 AL024508.2-201ENST00000607749 1894 ntBASIC18.84■□□□□ 0.61
VCPP55072 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 AC090340.1-201ENST00000620778 4980 ntBASIC18.83■□□□□ 0.61
VCPP55072 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCPP55072 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VCPP55072 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.83■□□□□ 0.6
VCPP55072 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.83■□□□□ 0.6
VCPP55072 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.83■□□□□ 0.6
VCPP55072 AC096582.2-201ENST00000510860 516 ntBASIC18.83■□□□□ 0.6
VCPP55072 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
VCPP55072 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.83■□□□□ 0.6
VCPP55072 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.83■□□□□ 0.6
VCPP55072 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VCPP55072 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
VCPP55072 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.83■□□□□ 0.6
VCPP55072 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.83■□□□□ 0.6
VCPP55072 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.83■□□□□ 0.6
VCPP55072 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCPP55072 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VCPP55072 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.82■□□□□ 0.6
VCPP55072 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.82■□□□□ 0.6
VCPP55072 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.82■□□□□ 0.6
VCPP55072 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.82■□□□□ 0.6
VCPP55072 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VCPP55072 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 AC244107.1-201ENST00000442033 332 ntBASIC18.82■□□□□ 0.6
VCPP55072 DNAJB3-202ENST00000449667 1266 ntBASIC18.82■□□□□ 0.6
VCPP55072 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.82■□□□□ 0.6
VCPP55072 AC034105.1-201ENST00000563488 319 ntBASIC18.82■□□□□ 0.6
VCPP55072 AC011840.4-201ENST00000578471 627 ntBASIC18.82■□□□□ 0.6
VCPP55072 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.82■□□□□ 0.6
VCPP55072 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.82■□□□□ 0.6
VCPP55072 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.82■□□□□ 0.6
VCPP55072 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.82■□□□□ 0.6
VCPP55072 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VCPP55072 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCPP55072 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.82■□□□□ 0.6
VCPP55072 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
VCPP55072 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCPP55072 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCPP55072 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCPP55072 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCPP55072 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCPP55072 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.81■□□□□ 0.6
VCPP55072 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCPP55072 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VCPP55072 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VCPP55072 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VCPP55072 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VCPP55072 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VCPP55072 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms