Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.18■□□□□ 0.82
HMGCS2P54868 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCS2P54868 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGCS2P54868 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCS2P54868 AC093028.1-201ENST00000622998 982 ntBASIC20.18■□□□□ 0.82
HMGCS2P54868 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.18■□□□□ 0.82
HMGCS2P54868 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HMGCS2P54868 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGCS2P54868 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGCS2P54868 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS2P54868 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGCS2P54868 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGCS2P54868 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HMGCS2P54868 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS2P54868 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS2P54868 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS2P54868 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HMGCS2P54868 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS2P54868 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS2P54868 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS2P54868 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCS2P54868 AC098818.2-201ENST00000564925 2320 ntBASIC20.18■□□□□ 0.82
HMGCS2P54868 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
HMGCS2P54868 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCS2P54868 ACTG1P14-201ENST00000446382 1122 ntBASIC20.17■□□□□ 0.82
HMGCS2P54868 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCS2P54868 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCS2P54868 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.17■□□□□ 0.82
HMGCS2P54868 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HMGCS2P54868 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HMGCS2P54868 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.17■□□□□ 0.82
HMGCS2P54868 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.17■□□□□ 0.82
HMGCS2P54868 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.17■□□□□ 0.82
HMGCS2P54868 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HMGCS2P54868 AC092902.6-201ENST00000641783 218 ntBASIC20.17■□□□□ 0.82
HMGCS2P54868 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCS2P54868 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS2P54868 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS2P54868 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS2P54868 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HMGCS2P54868 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS2P54868 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS2P54868 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS2P54868 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCS2P54868 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCS2P54868 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCS2P54868 AP000344.2-201ENST00000512987 629 ntBASIC20.16■□□□□ 0.82
HMGCS2P54868 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HMGCS2P54868 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HMGCS2P54868 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCS2P54868 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.16■□□□□ 0.82
HMGCS2P54868 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
HMGCS2P54868 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCS2P54868 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCS2P54868 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
HMGCS2P54868 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCS2P54868 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.16■□□□□ 0.82
HMGCS2P54868 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCS2P54868 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HMGCS2P54868 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HMGCS2P54868 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
HMGCS2P54868 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCS2P54868 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 AL139400.1-201ENST00000366220 510 ntBASIC20.15■□□□□ 0.82
HMGCS2P54868 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGCS2P54868 TSEN15P1-201ENST00000423257 515 ntBASIC20.15■□□□□ 0.82
HMGCS2P54868 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.15■□□□□ 0.82
HMGCS2P54868 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
HMGCS2P54868 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGCS2P54868 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.15■□□□□ 0.82
HMGCS2P54868 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCS2P54868 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCS2P54868 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 KRT18P55-202ENST00000578578 1546 ntBASIC20.15■□□□□ 0.82
HMGCS2P54868 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HMGCS2P54868 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCS2P54868 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGCS2P54868 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCS2P54868 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.15■□□□□ 0.82
HMGCS2P54868 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCS2P54868 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.14■□□□□ 0.82
HMGCS2P54868 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS2P54868 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS2P54868 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS2P54868 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCS2P54868 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms