Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP1B3P54709 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP1B3P54709 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP1B3P54709 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP1B3P54709 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 DDX43P3-201ENST00000441064 443 ntBASIC15.29■□□□□ 0.04
ATP1B3P54709 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.29■□□□□ 0.04
ATP1B3P54709 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.29■□□□□ 0.04
ATP1B3P54709 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.29■□□□□ 0.04
ATP1B3P54709 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.29■□□□□ 0.04
ATP1B3P54709 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP1B3P54709 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATP1B3P54709 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP1B3P54709 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP1B3P54709 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATP1B3P54709 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP1B3P54709 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP1B3P54709 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP1B3P54709 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
ATP1B3P54709 AL138688.1-201ENST00000624851 1594 ntBASIC15.28■□□□□ 0.04
ATP1B3P54709 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.28■□□□□ 0.04
ATP1B3P54709 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP1B3P54709 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP1B3P54709 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP1B3P54709 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP1B3P54709 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP1B3P54709 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ATP1B3P54709 AL137013.1-201ENST00000432946 1228 ntBASIC15.28■□□□□ 0.04
ATP1B3P54709 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.28■□□□□ 0.04
ATP1B3P54709 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP1B3P54709 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP1B3P54709 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP1B3P54709 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP1B3P54709 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATP1B3P54709 AC005363.2-201ENST00000618631 242 ntBASIC15.28■□□□□ 0.04
ATP1B3P54709 LINC01451-201ENST00000623792 534 ntBASIC15.28■□□□□ 0.04
ATP1B3P54709 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATP1B3P54709 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATP1B3P54709 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP1B3P54709 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATP1B3P54709 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP1B3P54709 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP1B3P54709 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
ATP1B3P54709 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP1B3P54709 AC011270.2-201ENST00000624293 2550 ntBASIC15.28■□□□□ 0.04
ATP1B3P54709 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP1B3P54709 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATP1B3P54709 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP1B3P54709 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP1B3P54709 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP1B3P54709 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP1B3P54709 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 TSPY12P-201ENST00000421279 868 ntBASIC15.27■□□□□ 0.04
ATP1B3P54709 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.27■□□□□ 0.04
ATP1B3P54709 BX664615.1-201ENST00000443558 458 ntBASIC15.27■□□□□ 0.04
ATP1B3P54709 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.27■□□□□ 0.04
ATP1B3P54709 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP1B3P54709 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP1B3P54709 AC010203.1-204ENST00000548782 407 ntBASIC15.27■□□□□ 0.04
ATP1B3P54709 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.27■□□□□ 0.04
ATP1B3P54709 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP1B3P54709 AL441883.1-201ENST00000566170 1045 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms