Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC24.92■■□□□ 1.58
CLTCL1P53675 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC24.92■■□□□ 1.58
CLTCL1P53675 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC24.92■■□□□ 1.58
CLTCL1P53675 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CLTCL1P53675 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLTCL1P53675 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLTCL1P53675 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC24.91■■□□□ 1.58
CLTCL1P53675 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
CLTCL1P53675 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLTCL1P53675 ABALON-201ENST00000629058 1903 ntBASIC24.91■■□□□ 1.58
CLTCL1P53675 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLTCL1P53675 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CLTCL1P53675 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CLTCL1P53675 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CLTCL1P53675 ACTG1P14-201ENST00000446382 1122 ntBASIC24.91■■□□□ 1.58
CLTCL1P53675 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CLTCL1P53675 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC24.91■■□□□ 1.58
CLTCL1P53675 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CLTCL1P53675 LINC01451-201ENST00000623792 534 ntBASIC24.91■■□□□ 1.58
CLTCL1P53675 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CLTCL1P53675 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC24.91■■□□□ 1.58
CLTCL1P53675 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC24.91■■□□□ 1.58
CLTCL1P53675 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLTCL1P53675 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC24.91■■□□□ 1.58
CLTCL1P53675 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
CLTCL1P53675 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC24.91■■□□□ 1.58
CLTCL1P53675 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.9■■□□□ 1.58
CLTCL1P53675 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLTCL1P53675 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLTCL1P53675 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLTCL1P53675 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLTCL1P53675 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC24.9■■□□□ 1.58
CLTCL1P53675 AC023141.5-201ENST00000458585 616 ntBASIC24.9■■□□□ 1.58
CLTCL1P53675 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC24.9■■□□□ 1.58
CLTCL1P53675 AC009093.7-201ENST00000623853 1223 ntBASIC24.9■■□□□ 1.58
CLTCL1P53675 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC24.9■■□□□ 1.58
CLTCL1P53675 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLTCL1P53675 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLTCL1P53675 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC24.9■■□□□ 1.58
CLTCL1P53675 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLTCL1P53675 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLTCL1P53675 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC24.9■■□□□ 1.58
CLTCL1P53675 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC24.9■■□□□ 1.58
CLTCL1P53675 AL355306.1-201ENST00000415580 579 ntBASIC24.9■■□□□ 1.58
CLTCL1P53675 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
CLTCL1P53675 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC24.9■■□□□ 1.58
CLTCL1P53675 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC24.9■■□□□ 1.58
CLTCL1P53675 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CLTCL1P53675 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC24.9■■□□□ 1.58
CLTCL1P53675 METTL23-205ENST00000588302 925 ntTSL 5 BASIC24.9■■□□□ 1.58
CLTCL1P53675 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC24.9■■□□□ 1.58
CLTCL1P53675 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CLTCL1P53675 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CLTCL1P53675 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CLTCL1P53675 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
CLTCL1P53675 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CLTCL1P53675 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CLTCL1P53675 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC24.89■■□□□ 1.58
CLTCL1P53675 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CLTCL1P53675 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CLTCL1P53675 HARS-203ENST00000431330 1774 ntTSL 2 BASIC24.89■■□□□ 1.57
CLTCL1P53675 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CLTCL1P53675 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CLTCL1P53675 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CLTCL1P53675 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC24.89■■□□□ 1.57
CLTCL1P53675 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC24.89■■□□□ 1.57
CLTCL1P53675 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC24.89■■□□□ 1.57
CLTCL1P53675 THTPA-204ENST00000554970 569 ntTSL 4 BASIC24.89■■□□□ 1.57
CLTCL1P53675 THTPA-206ENST00000556015 535 ntTSL 3 BASIC24.89■■□□□ 1.57
CLTCL1P53675 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC24.89■■□□□ 1.57
CLTCL1P53675 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC24.89■■□□□ 1.57
CLTCL1P53675 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC24.89■■□□□ 1.57
CLTCL1P53675 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
CLTCL1P53675 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CLTCL1P53675 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.57
CLTCL1P53675 REM2-202ENST00000536884 1331 ntTSL 2 BASIC24.89■■□□□ 1.57
CLTCL1P53675 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC24.88■■□□□ 1.57
CLTCL1P53675 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CLTCL1P53675 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CLTCL1P53675 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC24.88■■□□□ 1.57
CLTCL1P53675 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC24.88■■□□□ 1.57
CLTCL1P53675 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC24.88■■□□□ 1.57
CLTCL1P53675 AC093520.2-201ENST00000561830 333 ntBASIC24.88■■□□□ 1.57
CLTCL1P53675 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CLTCL1P53675 AC106028.4-201ENST00000614509 607 ntBASIC24.88■■□□□ 1.57
CLTCL1P53675 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CLTCL1P53675 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CLTCL1P53675 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
CLTCL1P53675 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CLTCL1P53675 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CLTCL1P53675 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CLTCL1P53675 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms