Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ACLYP53396 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACLYP53396 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ACLYP53396 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.24■□□□□ 0.67
ACLYP53396 AC002056.1-201ENST00000395613 760 ntBASIC19.24■□□□□ 0.67
ACLYP53396 AL627223.1-201ENST00000416693 442 ntBASIC19.24■□□□□ 0.67
ACLYP53396 AC244107.1-201ENST00000442033 332 ntBASIC19.24■□□□□ 0.67
ACLYP53396 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ACLYP53396 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ACLYP53396 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.24■□□□□ 0.67
ACLYP53396 AC015911.4-201ENST00000588022 1070 ntBASIC19.24■□□□□ 0.67
ACLYP53396 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.24■□□□□ 0.67
ACLYP53396 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ACLYP53396 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ACLYP53396 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 AC009093.7-201ENST00000623853 1223 ntBASIC19.24■□□□□ 0.67
ACLYP53396 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.24■□□□□ 0.67
ACLYP53396 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ACLYP53396 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACLYP53396 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ACLYP53396 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ACLYP53396 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.23■□□□□ 0.67
ACLYP53396 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.23■□□□□ 0.67
ACLYP53396 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.23■□□□□ 0.67
ACLYP53396 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.23■□□□□ 0.67
ACLYP53396 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.23■□□□□ 0.67
ACLYP53396 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.23■□□□□ 0.67
ACLYP53396 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.23■□□□□ 0.67
ACLYP53396 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.23■□□□□ 0.67
ACLYP53396 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.23■□□□□ 0.67
ACLYP53396 AL390955.2-201ENST00000603032 514 ntBASIC19.23■□□□□ 0.67
ACLYP53396 AC026120.1-201ENST00000611536 926 ntBASIC19.23■□□□□ 0.67
ACLYP53396 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.23■□□□□ 0.67
ACLYP53396 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.23■□□□□ 0.67
ACLYP53396 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ACLYP53396 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.23■□□□□ 0.67
ACLYP53396 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ACLYP53396 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.22■□□□□ 0.67
ACLYP53396 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.22■□□□□ 0.67
ACLYP53396 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ACLYP53396 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.22■□□□□ 0.67
ACLYP53396 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.22■□□□□ 0.67
ACLYP53396 DUX4L27-201ENST00000554796 1261 ntBASIC19.22■□□□□ 0.67
ACLYP53396 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.22■□□□□ 0.67
ACLYP53396 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.22■□□□□ 0.67
ACLYP53396 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.22■□□□□ 0.67
ACLYP53396 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ACLYP53396 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ACLYP53396 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ACLYP53396 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.22■□□□□ 0.67
ACLYP53396 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACLYP53396 AC135776.1-201ENST00000319817 2481 ntBASIC19.22■□□□□ 0.67
ACLYP53396 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACLYP53396 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ACLYP53396 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.21■□□□□ 0.67
ACLYP53396 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACLYP53396 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACLYP53396 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.21■□□□□ 0.67
ACLYP53396 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACLYP53396 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACLYP53396 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms