Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GTF2A1P52655 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.27■□□□□ 0.35
GTF2A1P52655 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.27■□□□□ 0.35
GTF2A1P52655 AC007686.3-201ENST00000619017 3487 ntBASIC17.27■□□□□ 0.35
GTF2A1P52655 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GTF2A1P52655 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.27■□□□□ 0.35
GTF2A1P52655 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
GTF2A1P52655 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GTF2A1P52655 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GTF2A1P52655 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2A1P52655 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GTF2A1P52655 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GTF2A1P52655 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.26■□□□□ 0.35
GTF2A1P52655 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 KRT18P68-201ENST00000392293 1000 ntBASIC17.26■□□□□ 0.35
GTF2A1P52655 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 RARRES2P4-201ENST00000514074 484 ntBASIC17.26■□□□□ 0.35
GTF2A1P52655 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2A1P52655 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.26■□□□□ 0.35
GTF2A1P52655 AC100791.3-201ENST00000617619 330 ntBASIC17.26■□□□□ 0.35
GTF2A1P52655 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.26■□□□□ 0.35
GTF2A1P52655 AC013268.1-206ENST00000638368 961 ntBASIC17.26■□□□□ 0.35
GTF2A1P52655 AC112229.1-201ENST00000639295 961 ntBASIC17.26■□□□□ 0.35
GTF2A1P52655 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GTF2A1P52655 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.26■□□□□ 0.35
GTF2A1P52655 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.26■□□□□ 0.35
GTF2A1P52655 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GTF2A1P52655 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2A1P52655 ZNF815P-204ENST00000434898 1737 ntBASIC17.26■□□□□ 0.35
GTF2A1P52655 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
GTF2A1P52655 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GTF2A1P52655 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2A1P52655 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.26■□□□□ 0.35
GTF2A1P52655 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2A1P52655 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.25■□□□□ 0.35
GTF2A1P52655 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.25■□□□□ 0.35
GTF2A1P52655 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GTF2A1P52655 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2A1P52655 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GTF2A1P52655 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.25■□□□□ 0.35
GTF2A1P52655 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2A1P52655 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.25■□□□□ 0.35
GTF2A1P52655 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2A1P52655 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2A1P52655 AC007326.2-201ENST00000624224 7579 ntBASIC17.25■□□□□ 0.35
GTF2A1P52655 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2A1P52655 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.24■□□□□ 0.35
GTF2A1P52655 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2A1P52655 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
GTF2A1P52655 FEM1AP3-201ENST00000403722 1741 ntBASIC17.24■□□□□ 0.35
GTF2A1P52655 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2A1P52655 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2A1P52655 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2A1P52655 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2A1P52655 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.24■□□□□ 0.35
GTF2A1P52655 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2A1P52655 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2A1P52655 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2A1P52655 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms