Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PRYP5-201ENST00000451909 266 ntBASIC17.25■□□□□ 0.35
CLCNKAP51800 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCNKAP51800 AC002558.1-201ENST00000488906 803 ntBASIC17.25■□□□□ 0.35
CLCNKAP51800 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCNKAP51800 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCNKAP51800 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.25■□□□□ 0.35
CLCNKAP51800 AL773604.1-201ENST00000617417 272 ntBASIC17.25■□□□□ 0.35
CLCNKAP51800 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKAP51800 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLCNKAP51800 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKAP51800 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CLCNKAP51800 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLCNKAP51800 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLCNKAP51800 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKAP51800 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.25■□□□□ 0.35
CLCNKAP51800 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKAP51800 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCNKAP51800 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLCNKAP51800 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CLCNKAP51800 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.24■□□□□ 0.35
CLCNKAP51800 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCNKAP51800 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLCNKAP51800 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.24■□□□□ 0.35
CLCNKAP51800 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCNKAP51800 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CLCNKAP51800 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLCNKAP51800 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CLCNKAP51800 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CLCNKAP51800 RNPS1P1-201ENST00000507437 918 ntBASIC17.24■□□□□ 0.35
CLCNKAP51800 AC073648.2-201ENST00000510116 352 ntBASIC17.24■□□□□ 0.35
CLCNKAP51800 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.24■□□□□ 0.35
CLCNKAP51800 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.24■□□□□ 0.35
CLCNKAP51800 SART3-203ENST00000546611 1184 ntBASIC17.24■□□□□ 0.35
CLCNKAP51800 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCNKAP51800 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCNKAP51800 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKAP51800 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLCNKAP51800 HLA-A-201ENST00000376802 1334 ntBASIC17.23■□□□□ 0.35
CLCNKAP51800 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKAP51800 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLCNKAP51800 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CLCNKAP51800 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCNKAP51800 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKAP51800 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCNKAP51800 AC020916.1-201ENST00000587762 1774 ntBASIC17.23■□□□□ 0.35
CLCNKAP51800 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCNKAP51800 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKAP51800 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKAP51800 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLCNKAP51800 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 RNA5SP419-201ENST00000515908 135 ntBASIC17.23■□□□□ 0.35
CLCNKAP51800 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKAP51800 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKAP51800 AC021087.4-201ENST00000563761 564 ntBASIC17.23■□□□□ 0.35
CLCNKAP51800 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CLCNKAP51800 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.23■□□□□ 0.35
CLCNKAP51800 NKAPP1-205ENST00000585790 367 ntBASIC17.23■□□□□ 0.35
CLCNKAP51800 AC073592.5-201ENST00000624854 528 ntBASIC17.23■□□□□ 0.35
CLCNKAP51800 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLCNKAP51800 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKAP51800 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKAP51800 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCNKAP51800 OR6D1P-202ENST00000641007 5290 ntBASIC17.23■□□□□ 0.35
CLCNKAP51800 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms