Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GPC3P51654 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
GPC3P51654 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GPC3P51654 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.41■□□□□ 0.7
GPC3P51654 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GPC3P51654 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
GPC3P51654 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GPC3P51654 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.4■□□□□ 0.7
GPC3P51654 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GPC3P51654 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
GPC3P51654 AC132938.5-201ENST00000624980 1813 ntBASIC19.4■□□□□ 0.7
GPC3P51654 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC3P51654 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC3P51654 PRYP5-201ENST00000451909 266 ntBASIC19.4■□□□□ 0.7
GPC3P51654 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.4■□□□□ 0.7
GPC3P51654 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.4■□□□□ 0.7
GPC3P51654 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.4■□□□□ 0.7
GPC3P51654 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
GPC3P51654 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
GPC3P51654 AC067852.2-201ENST00000590513 2313 ntBASIC19.4■□□□□ 0.7
GPC3P51654 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC3P51654 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GPC3P51654 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GPC3P51654 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GPC3P51654 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GPC3P51654 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GPC3P51654 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.39■□□□□ 0.69
GPC3P51654 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 LAGE3P1-201ENST00000425356 484 ntBASIC19.39■□□□□ 0.69
GPC3P51654 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.39■□□□□ 0.69
GPC3P51654 AC092910.1-201ENST00000482027 1129 ntBASIC19.39■□□□□ 0.69
GPC3P51654 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.39■□□□□ 0.69
GPC3P51654 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.39■□□□□ 0.69
GPC3P51654 BX276092.7-203ENST00000637198 1536 ntBASIC19.39■□□□□ 0.69
GPC3P51654 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 AC006116.8-202ENST00000587620 1550 ntBASIC19.39■□□□□ 0.69
GPC3P51654 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
GPC3P51654 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GPC3P51654 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC3P51654 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC3P51654 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC3P51654 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC3P51654 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC3P51654 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GPC3P51654 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC3P51654 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC3P51654 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC3P51654 AC098831.1-202ENST00000438821 336 ntBASIC19.38■□□□□ 0.69
GPC3P51654 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC3P51654 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC3P51654 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC3P51654 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC3P51654 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC3P51654 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GPC3P51654 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms