Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.68■□□□□ 0.9
NEDD4P46934 FAAHP1-202ENST00000446499 1238 ntBASIC20.68■□□□□ 0.9
NEDD4P46934 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NEDD4P46934 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
NEDD4P46934 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.68■□□□□ 0.9
NEDD4P46934 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
NEDD4P46934 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.68■□□□□ 0.9
NEDD4P46934 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NEDD4P46934 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NEDD4P46934 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NEDD4P46934 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.68■□□□□ 0.9
NEDD4P46934 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.68■□□□□ 0.9
NEDD4P46934 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.67■□□□□ 0.9
NEDD4P46934 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.67■□□□□ 0.9
NEDD4P46934 SIGLEC16-201ENST00000599858 1437 ntBASIC20.67■□□□□ 0.9
NEDD4P46934 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.67■□□□□ 0.9
NEDD4P46934 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.67■□□□□ 0.9
NEDD4P46934 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.67■□□□□ 0.9
NEDD4P46934 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NEDD4P46934 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.67■□□□□ 0.9
NEDD4P46934 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 AP002469.2-201ENST00000531724 424 ntBASIC20.67■□□□□ 0.9
NEDD4P46934 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.67■□□□□ 0.9
NEDD4P46934 NKAPP1-205ENST00000585790 367 ntBASIC20.67■□□□□ 0.9
NEDD4P46934 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.67■□□□□ 0.9
NEDD4P46934 AL356309.3-201ENST00000624132 1934 ntBASIC20.67■□□□□ 0.9
NEDD4P46934 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.67■□□□□ 0.9
NEDD4P46934 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD4P46934 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD4P46934 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD4P46934 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.66■□□□□ 0.9
NEDD4P46934 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD4P46934 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 MYCLP1-201ENST00000372451 1075 ntBASIC20.66■□□□□ 0.9
NEDD4P46934 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD4P46934 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NEDD4P46934 TPM4P1-201ENST00000436100 807 ntBASIC20.66■□□□□ 0.9
NEDD4P46934 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NEDD4P46934 AC009078.2-202ENST00000463353 338 ntBASIC20.66■□□□□ 0.9
NEDD4P46934 STK19B-204ENST00000512515 211 ntBASIC20.66■□□□□ 0.9
NEDD4P46934 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD4P46934 AL139288.1-201ENST00000623748 933 ntBASIC20.66■□□□□ 0.9
NEDD4P46934 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD4P46934 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.66■□□□□ 0.9
NEDD4P46934 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.66■□□□□ 0.9
NEDD4P46934 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD4P46934 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD4P46934 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
NEDD4P46934 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.65■□□□□ 0.9
NEDD4P46934 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.65■□□□□ 0.9
NEDD4P46934 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD4P46934 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NEDD4P46934 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD4P46934 AC148477.8-201ENST00000624298 468 ntBASIC20.65■□□□□ 0.9
NEDD4P46934 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NEDD4P46934 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
NEDD4P46934 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NEDD4P46934 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
NEDD4P46934 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 AC020916.1-201ENST00000587762 1774 ntBASIC20.65■□□□□ 0.9
NEDD4P46934 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms