Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.69■□□□□ 0.42
MDH1P40925 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MDH1P40925 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.69■□□□□ 0.42
MDH1P40925 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.69■□□□□ 0.42
MDH1P40925 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 KRT18P23-201ENST00000435622 1283 ntBASIC17.69■□□□□ 0.42
MDH1P40925 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.69■□□□□ 0.42
MDH1P40925 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.69■□□□□ 0.42
MDH1P40925 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.69■□□□□ 0.42
MDH1P40925 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.69■□□□□ 0.42
MDH1P40925 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.69■□□□□ 0.42
MDH1P40925 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MDH1P40925 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
MDH1P40925 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MDH1P40925 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.69■□□□□ 0.42
MDH1P40925 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
MDH1P40925 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MDH1P40925 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
MDH1P40925 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MDH1P40925 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MDH1P40925 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.68■□□□□ 0.42
MDH1P40925 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.68■□□□□ 0.42
MDH1P40925 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.68■□□□□ 0.42
MDH1P40925 LINC01311-201ENST00000565162 1445 ntBASIC17.68■□□□□ 0.42
MDH1P40925 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.68■□□□□ 0.42
MDH1P40925 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.68■□□□□ 0.42
MDH1P40925 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.68■□□□□ 0.42
MDH1P40925 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.68■□□□□ 0.42
MDH1P40925 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.68■□□□□ 0.42
MDH1P40925 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.68■□□□□ 0.42
MDH1P40925 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MDH1P40925 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.68■□□□□ 0.42
MDH1P40925 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
MDH1P40925 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.68■□□□□ 0.42
MDH1P40925 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
MDH1P40925 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MDH1P40925 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MDH1P40925 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.67■□□□□ 0.42
MDH1P40925 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MDH1P40925 RPS2P4-201ENST00000476944 856 ntBASIC17.67■□□□□ 0.42
MDH1P40925 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.67■□□□□ 0.42
MDH1P40925 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MDH1P40925 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.67■□□□□ 0.42
MDH1P40925 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 MTDHP1-201ENST00000605323 784 ntBASIC17.67■□□□□ 0.42
MDH1P40925 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 AC080038.1-201ENST00000611274 1154 ntBASIC17.67■□□□□ 0.42
MDH1P40925 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.67■□□□□ 0.42
MDH1P40925 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.67■□□□□ 0.42
MDH1P40925 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.67■□□□□ 0.42
MDH1P40925 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MDH1P40925 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 AL365203.3-201ENST00000609742 2057 ntBASIC17.67■□□□□ 0.42
MDH1P40925 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MDH1P40925 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
MDH1P40925 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MDH1P40925 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.66■□□□□ 0.42
MDH1P40925 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 KRT8P9-201ENST00000558927 1449 ntBASIC17.66■□□□□ 0.42
MDH1P40925 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MDH1P40925 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms