Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN1P35523 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLCN1P35523 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.04■□□□□ 0.8
CLCN1P35523 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.04■□□□□ 0.8
CLCN1P35523 AP006294.2-201ENST00000641667 209 ntBASIC20.04■□□□□ 0.8
CLCN1P35523 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CLCN1P35523 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN1P35523 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCN1P35523 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLCN1P35523 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.04■□□□□ 0.8
CLCN1P35523 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN1P35523 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CLCN1P35523 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CLCN1P35523 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CLCN1P35523 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCN1P35523 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.03■□□□□ 0.8
CLCN1P35523 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CLCN1P35523 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
CLCN1P35523 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN1P35523 SNORA78-201ENST00000459373 127 ntBASIC20.03■□□□□ 0.8
CLCN1P35523 DBET-201ENST00000630918 3363 ntBASIC20.03■□□□□ 0.8
CLCN1P35523 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN1P35523 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN1P35523 AC060834.1-201ENST00000443027 2032 ntBASIC20.03■□□□□ 0.8
CLCN1P35523 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN1P35523 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN1P35523 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN1P35523 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN1P35523 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLCN1P35523 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCN1P35523 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN1P35523 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN1P35523 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLCN1P35523 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN1P35523 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CLCN1P35523 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.02■□□□□ 0.8
CLCN1P35523 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN1P35523 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.02■□□□□ 0.8
CLCN1P35523 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCN1P35523 AP005242.2-201ENST00000580065 1175 ntBASIC20.02■□□□□ 0.8
CLCN1P35523 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLCN1P35523 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN1P35523 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN1P35523 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN1P35523 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN1P35523 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCN1P35523 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCN1P35523 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CLCN1P35523 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN1P35523 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN1P35523 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.02■□□□□ 0.79
CLCN1P35523 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN1P35523 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CLCN1P35523 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN1P35523 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.02■□□□□ 0.79
CLCN1P35523 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN1P35523 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN1P35523 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCN1P35523 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.01■□□□□ 0.79
CLCN1P35523 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CLCN1P35523 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.01■□□□□ 0.79
CLCN1P35523 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CLCN1P35523 PHGDH-209ENST00000641074 1780 ntBASIC20.01■□□□□ 0.79
CLCN1P35523 AL109659.2-201ENST00000606809 1674 ntBASIC20.01■□□□□ 0.79
CLCN1P35523 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLCN1P35523 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCN1P35523 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms