Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.49■□□□□ 0.55
MMP8P22894 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP8P22894 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.48■□□□□ 0.55
MMP8P22894 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MMP8P22894 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MMP8P22894 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.48■□□□□ 0.55
MMP8P22894 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 RCN1P2-201ENST00000398357 915 ntBASIC18.48■□□□□ 0.55
MMP8P22894 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.48■□□□□ 0.55
MMP8P22894 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
MMP8P22894 AC104819.1-201ENST00000504587 486 ntBASIC18.48■□□□□ 0.55
MMP8P22894 AC096582.2-201ENST00000510860 516 ntBASIC18.48■□□□□ 0.55
MMP8P22894 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
MMP8P22894 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.48■□□□□ 0.55
MMP8P22894 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
MMP8P22894 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MMP8P22894 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.48■□□□□ 0.55
MMP8P22894 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.48■□□□□ 0.55
MMP8P22894 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP8P22894 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
MMP8P22894 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MMP8P22894 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
MMP8P22894 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP8P22894 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP8P22894 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MMP8P22894 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.47■□□□□ 0.55
MMP8P22894 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MMP8P22894 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.47■□□□□ 0.55
MMP8P22894 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP8P22894 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.47■□□□□ 0.55
MMP8P22894 AC114341.1-201ENST00000618070 349 ntBASIC18.47■□□□□ 0.55
MMP8P22894 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.47■□□□□ 0.55
MMP8P22894 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MMP8P22894 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP8P22894 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP8P22894 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP8P22894 AC046185.3-201ENST00000623228 1824 ntBASIC18.46■□□□□ 0.55
MMP8P22894 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MMP8P22894 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP8P22894 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP8P22894 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MMP8P22894 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MMP8P22894 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MMP8P22894 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP8P22894 POM121L3P-201ENST00000419331 1163 ntBASIC18.46■□□□□ 0.55
MMP8P22894 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MMP8P22894 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP8P22894 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP8P22894 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP8P22894 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP8P22894 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP8P22894 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.46■□□□□ 0.55
MMP8P22894 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
MMP8P22894 AC080080.1-201ENST00000625121 2420 ntBASIC18.46■□□□□ 0.55
MMP8P22894 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP8P22894 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MMP8P22894 AC132938.5-201ENST00000624980 1813 ntBASIC18.46■□□□□ 0.55
MMP8P22894 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP8P22894 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
MMP8P22894 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP8P22894 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms