Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 SPDYE15P-201ENST00000424157 909 ntBASIC16.36■□□□□ 0.21
TNFRSF1BP20333 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 SLC25A3P1-201ENST00000443844 931 ntBASIC16.36■□□□□ 0.21
TNFRSF1BP20333 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 AC112698.1-201ENST00000510299 916 ntBASIC16.36■□□□□ 0.21
TNFRSF1BP20333 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 AL441883.1-201ENST00000566170 1045 ntBASIC16.36■□□□□ 0.21
TNFRSF1BP20333 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 AL118508.1-201ENST00000613502 2345 ntBASIC16.36■□□□□ 0.21
TNFRSF1BP20333 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 KRT89P-201ENST00000620027 1478 ntBASIC16.35■□□□□ 0.21
TNFRSF1BP20333 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 AC010203.1-204ENST00000548782 407 ntBASIC16.35■□□□□ 0.21
TNFRSF1BP20333 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF1BP20333 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 TSPY12P-201ENST00000421279 868 ntBASIC16.34■□□□□ 0.21
TNFRSF1BP20333 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TNFRSF1BP20333 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms