Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 TSSC2-201ENST00000450217 709 ntBASIC20.28■□□□□ 0.84
ATP2B1P20020 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2B1P20020 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.28■□□□□ 0.84
ATP2B1P20020 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2B1P20020 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2B1P20020 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP2B1P20020 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2B1P20020 AC139713.2-201ENST00000641328 2723 ntBASIC20.28■□□□□ 0.84
ATP2B1P20020 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2B1P20020 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2B1P20020 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2B1P20020 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
ATP2B1P20020 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP2B1P20020 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B1P20020 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP2B1P20020 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATP2B1P20020 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B1P20020 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP2B1P20020 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
ATP2B1P20020 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ATP2B1P20020 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B1P20020 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B1P20020 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
ATP2B1P20020 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2B1P20020 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2B1P20020 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.27■□□□□ 0.83
ATP2B1P20020 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2B1P20020 AC141586.5-201ENST00000624546 2050 ntBASIC20.26■□□□□ 0.83
ATP2B1P20020 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B1P20020 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B1P20020 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B1P20020 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B1P20020 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2B1P20020 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ATP2B1P20020 AP002383.4-201ENST00000442518 975 ntBASIC20.26■□□□□ 0.83
ATP2B1P20020 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP2B1P20020 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.26■□□□□ 0.83
ATP2B1P20020 AC093458.2-201ENST00000623150 629 ntBASIC20.26■□□□□ 0.83
ATP2B1P20020 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B1P20020 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B1P20020 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
ATP2B1P20020 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B1P20020 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2B1P20020 LINC00304-203ENST00000565008 1864 ntBASIC20.26■□□□□ 0.83
ATP2B1P20020 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B1P20020 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B1P20020 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B1P20020 AC010460.3-201ENST00000511359 1579 ntBASIC20.25■□□□□ 0.83
ATP2B1P20020 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B1P20020 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2B1P20020 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2B1P20020 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B1P20020 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2B1P20020 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP2B1P20020 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP2B1P20020 DDX43P3-201ENST00000441064 443 ntBASIC20.25■□□□□ 0.83
ATP2B1P20020 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP2B1P20020 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.25■□□□□ 0.83
ATP2B1P20020 AP002414.4-201ENST00000589764 1148 ntBASIC20.25■□□□□ 0.83
ATP2B1P20020 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATP2B1P20020 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B1P20020 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATP2B1P20020 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B1P20020 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B1P20020 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B1P20020 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms