Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
NFKB1P19838 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NFKB1P19838 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NFKB1P19838 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NFKB1P19838 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
NFKB1P19838 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.89■□□□□ 0.45
NFKB1P19838 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.89■□□□□ 0.45
NFKB1P19838 AC109462.3-201ENST00000573934 613 ntBASIC17.89■□□□□ 0.45
NFKB1P19838 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.89■□□□□ 0.45
NFKB1P19838 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.89■□□□□ 0.45
NFKB1P19838 Z69720.1-201ENST00000601483 472 ntBASIC17.89■□□□□ 0.45
NFKB1P19838 NPAP1P7-201ENST00000613027 823 ntBASIC17.89■□□□□ 0.45
NFKB1P19838 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.89■□□□□ 0.45
NFKB1P19838 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.89■□□□□ 0.45
NFKB1P19838 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.89■□□□□ 0.45
NFKB1P19838 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.89■□□□□ 0.45
NFKB1P19838 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NFKB1P19838 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NFKB1P19838 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NFKB1P19838 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NFKB1P19838 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NFKB1P19838 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.88■□□□□ 0.45
NFKB1P19838 FAM220CP-201ENST00000395253 831 ntBASIC17.88■□□□□ 0.45
NFKB1P19838 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.88■□□□□ 0.45
NFKB1P19838 AC122714.2-201ENST00000502787 707 ntBASIC17.88■□□□□ 0.45
NFKB1P19838 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NFKB1P19838 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 AL139327.4-201ENST00000612362 153 ntBASIC17.88■□□□□ 0.45
NFKB1P19838 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 AC012313.1-201ENST00000593393 3059 ntBASIC17.88■□□□□ 0.45
NFKB1P19838 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NFKB1P19838 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.88■□□□□ 0.45
NFKB1P19838 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.88■□□□□ 0.45
NFKB1P19838 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
NFKB1P19838 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.87■□□□□ 0.45
NFKB1P19838 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.87■□□□□ 0.45
NFKB1P19838 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NFKB1P19838 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 KRT17P6-201ENST00000453795 1220 ntBASIC17.87■□□□□ 0.45
NFKB1P19838 AC009533.2-201ENST00000543664 586 ntBASIC17.87■□□□□ 0.45
NFKB1P19838 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.87■□□□□ 0.45
NFKB1P19838 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 AC092119.3-201ENST00000612618 583 ntBASIC17.87■□□□□ 0.45
NFKB1P19838 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NFKB1P19838 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms