Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPN1P18031 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPN1P18031 KLF4P1-201ENST00000412782 1185 ntBASIC18.61■□□□□ 0.57
PTPN1P18031 PRYP5-201ENST00000451909 266 ntBASIC18.61■□□□□ 0.57
PTPN1P18031 AC018712.1-201ENST00000455767 687 ntBASIC18.61■□□□□ 0.57
PTPN1P18031 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 STK19B-204ENST00000512515 211 ntBASIC18.61■□□□□ 0.57
PTPN1P18031 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN1P18031 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 MTDHP4-201ENST00000600287 670 ntBASIC18.61■□□□□ 0.57
PTPN1P18031 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 AL773604.1-201ENST00000617417 272 ntBASIC18.61■□□□□ 0.57
PTPN1P18031 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPN1P18031 LINC00304-203ENST00000565008 1864 ntBASIC18.6■□□□□ 0.57
PTPN1P18031 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN1P18031 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 HLA-A-201ENST00000376802 1334 ntBASIC18.6■□□□□ 0.57
PTPN1P18031 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTPN1P18031 HNRNPDP1-201ENST00000439535 754 ntBASIC18.6■□□□□ 0.57
PTPN1P18031 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN1P18031 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN1P18031 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN1P18031 AC025062.2-201ENST00000605477 670 ntBASIC18.6■□□□□ 0.57
PTPN1P18031 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN1P18031 AL022326.1-202ENST00000641533 845 ntBASIC18.6■□□□□ 0.57
PTPN1P18031 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PTPN1P18031 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTPN1P18031 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN1P18031 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN1P18031 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTPN1P18031 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN1P18031 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN1P18031 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN1P18031 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 AL355312.1-201ENST00000407115 2176 ntBASIC18.59■□□□□ 0.57
PTPN1P18031 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PTPN1P18031 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN1P18031 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTPN1P18031 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN1P18031 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PTPN1P18031 RNA5SP419-201ENST00000515908 135 ntBASIC18.59■□□□□ 0.57
PTPN1P18031 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN1P18031 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN1P18031 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN1P18031 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN1P18031 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PTPN1P18031 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 AC148477.5-201ENST00000625164 1645 ntBASIC18.59■□□□□ 0.57
PTPN1P18031 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN1P18031 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN1P18031 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PTPN1P18031 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN1P18031 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
PTPN1P18031 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN1P18031 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN1P18031 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PTPN1P18031 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms