Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PEPDP12955 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PEPDP12955 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEPDP12955 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEPDP12955 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEPDP12955 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEPDP12955 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.31■□□□□ 0.2
PEPDP12955 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEPDP12955 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PEPDP12955 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PEPDP12955 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.3■□□□□ 0.2
PEPDP12955 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.3■□□□□ 0.2
PEPDP12955 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.3■□□□□ 0.2
PEPDP12955 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.3■□□□□ 0.2
PEPDP12955 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.3■□□□□ 0.2
PEPDP12955 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.3■□□□□ 0.2
PEPDP12955 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
PEPDP12955 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.3■□□□□ 0.2
PEPDP12955 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PEPDP12955 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PEPDP12955 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PEPDP12955 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PEPDP12955 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 AC124067.4-201ENST00000519691 2379 ntBASIC16.29■□□□□ 0.2
PEPDP12955 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PEPDP12955 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PEPDP12955 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PEPDP12955 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.29■□□□□ 0.2
PEPDP12955 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.29■□□□□ 0.2
PEPDP12955 RN7SL606P-201ENST00000472779 293 ntBASIC16.29■□□□□ 0.2
PEPDP12955 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.29■□□□□ 0.2
PEPDP12955 TPSP2-201ENST00000561760 610 ntBASIC16.29■□□□□ 0.2
PEPDP12955 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.29■□□□□ 0.2
PEPDP12955 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.29■□□□□ 0.2
PEPDP12955 MIR3652-201ENST00000579335 131 ntBASIC16.29■□□□□ 0.2
PEPDP12955 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PEPDP12955 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.29■□□□□ 0.2
PEPDP12955 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 AC009154.2-201ENST00000621177 724 ntBASIC16.29■□□□□ 0.2
PEPDP12955 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.29■□□□□ 0.2
PEPDP12955 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.29■□□□□ 0.2
PEPDP12955 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.29■□□□□ 0.2
PEPDP12955 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEPDP12955 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PEPDP12955 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.28■□□□□ 0.2
PEPDP12955 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PEPDP12955 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PEPDP12955 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEPDP12955 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.28■□□□□ 0.2
PEPDP12955 LINC00265-3P-201ENST00000447588 903 ntBASIC16.28■□□□□ 0.2
PEPDP12955 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.28■□□□□ 0.2
PEPDP12955 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms