Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LAMP1P11279 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.67■□□□□ 0.26
LAMP1P11279 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LAMP1P11279 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LAMP1P11279 AL671277.2-201ENST00000458060 996 ntBASIC16.67■□□□□ 0.26
LAMP1P11279 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.67■□□□□ 0.26
LAMP1P11279 AC022616.7-201ENST00000525383 220 ntBASIC16.67■□□□□ 0.26
LAMP1P11279 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.67■□□□□ 0.26
LAMP1P11279 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.67■□□□□ 0.26
LAMP1P11279 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.67■□□□□ 0.26
LAMP1P11279 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 RN7SL850P-201ENST00000579959 291 ntBASIC16.67■□□□□ 0.26
LAMP1P11279 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LAMP1P11279 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LAMP1P11279 AL139327.4-201ENST00000612362 153 ntBASIC16.67■□□□□ 0.26
LAMP1P11279 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.67■□□□□ 0.26
LAMP1P11279 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 NKILA-202ENST00000614771 2598 ntBASIC16.66■□□□□ 0.26
LAMP1P11279 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.66■□□□□ 0.26
LAMP1P11279 COX5BP2-201ENST00000392354 334 ntBASIC16.66■□□□□ 0.26
LAMP1P11279 RCN1P1-201ENST00000400413 996 ntBASIC16.66■□□□□ 0.26
LAMP1P11279 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.66■□□□□ 0.26
LAMP1P11279 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LAMP1P11279 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.66■□□□□ 0.26
LAMP1P11279 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.66■□□□□ 0.26
LAMP1P11279 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.66■□□□□ 0.26
LAMP1P11279 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LAMP1P11279 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LAMP1P11279 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.65■□□□□ 0.26
LAMP1P11279 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.65■□□□□ 0.26
LAMP1P11279 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LAMP1P11279 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LAMP1P11279 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LAMP1P11279 AL645929.1-201ENST00000420084 975 ntBASIC16.65■□□□□ 0.26
LAMP1P11279 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 DUX4L26-201ENST00000489078 1255 ntBASIC16.65■□□□□ 0.26
LAMP1P11279 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.65■□□□□ 0.26
LAMP1P11279 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.65■□□□□ 0.26
LAMP1P11279 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.65■□□□□ 0.26
LAMP1P11279 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 AL121761.2-201ENST00000598007 1648 ntBASIC16.65■□□□□ 0.26
LAMP1P11279 AC011676.5-201ENST00000624864 2660 ntBASIC16.65■□□□□ 0.26
LAMP1P11279 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LAMP1P11279 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms