Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 AL096828.2-201ENST00000567259 1965 ntBASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 AL020989.1-201ENST00000422979 469 ntBASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 AC139530.3-201ENST00000620344 690 ntBASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RAB40ALP0C0E4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 BX842568.4-201ENST00000421222 227 ntBASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 MED15P5-201ENST00000423150 992 ntBASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 KRT18P27-201ENST00000427733 1299 ntBASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 UNC93B6-202ENST00000528242 690 ntBASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AC092865.5-201ENST00000545435 363 ntBASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AC140113.2-201ENST00000604370 208 ntBASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 AL589182.2-201ENST00000619332 1049 ntBASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 MIR1199-201ENST00000621445 119 ntBASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RAB40ALP0C0E4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 AP002414.3-201ENST00000589352 1468 ntBASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 AC093677.2-201ENST00000600169 1863 ntBASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 PGAM5P1-201ENST00000518923 814 ntBASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 AL356488.2-201ENST00000602755 427 ntBASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms