Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.06■□□□□ 0.8
TPM2P07951 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TPM2P07951 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 TSPY17P-201ENST00000450329 467 ntBASIC20.06■□□□□ 0.8
TPM2P07951 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.06■□□□□ 0.8
TPM2P07951 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TPM2P07951 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
TPM2P07951 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
TPM2P07951 AC022188.1-201ENST00000620960 1664 ntBASIC20.06■□□□□ 0.8
TPM2P07951 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TPM2P07951 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.06■□□□□ 0.8
TPM2P07951 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TPM2P07951 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TPM2P07951 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 SDHAP2-201ENST00000455183 2001 ntBASIC20.05■□□□□ 0.8
TPM2P07951 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.05■□□□□ 0.8
TPM2P07951 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TPM2P07951 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.05■□□□□ 0.8
TPM2P07951 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.05■□□□□ 0.8
TPM2P07951 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.05■□□□□ 0.8
TPM2P07951 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TPM2P07951 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TPM2P07951 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.05■□□□□ 0.8
TPM2P07951 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 SLC25A1P2-201ENST00000430693 912 ntBASIC20.05■□□□□ 0.8
TPM2P07951 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.05■□□□□ 0.8
TPM2P07951 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.05■□□□□ 0.8
TPM2P07951 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.05■□□□□ 0.8
TPM2P07951 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.05■□□□□ 0.8
TPM2P07951 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TPM2P07951 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TPM2P07951 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TPM2P07951 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TPM2P07951 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TPM2P07951 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.04■□□□□ 0.8
TPM2P07951 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM2P07951 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.04■□□□□ 0.8
TPM2P07951 CCR12P-201ENST00000446203 998 ntBASIC20.04■□□□□ 0.8
TPM2P07951 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 MIR4674-201ENST00000582457 87 ntBASIC20.04■□□□□ 0.8
TPM2P07951 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.04■□□□□ 0.8
TPM2P07951 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.04■□□□□ 0.8
TPM2P07951 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
TPM2P07951 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.04■□□□□ 0.8
TPM2P07951 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM2P07951 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM2P07951 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
TPM2P07951 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.04■□□□□ 0.8
TPM2P07951 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM2P07951 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.03■□□□□ 0.8
TPM2P07951 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TPM2P07951 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.03■□□□□ 0.8
TPM2P07951 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.03■□□□□ 0.8
TPM2P07951 AL603756.1-201ENST00000606511 2163 ntBASIC20.03■□□□□ 0.8
TPM2P07951 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 UNC93B2-201ENST00000285383 730 ntBASIC20.03■□□□□ 0.8
TPM2P07951 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.03■□□□□ 0.8
TPM2P07951 GCSHP5-201ENST00000443090 522 ntBASIC20.03■□□□□ 0.8
TPM2P07951 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.03■□□□□ 0.8
TPM2P07951 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.03■□□□□ 0.8
TPM2P07951 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM2P07951 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.03■□□□□ 0.8
TPM2P07951 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms