Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HMGN1P05114 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGN1P05114 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGN1P05114 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
HMGN1P05114 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.95■□□□□ 0.14
HMGN1P05114 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
HMGN1P05114 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.95■□□□□ 0.14
HMGN1P05114 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGN1P05114 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.95■□□□□ 0.14
HMGN1P05114 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
HMGN1P05114 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGN1P05114 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGN1P05114 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGN1P05114 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
HMGN1P05114 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.95■□□□□ 0.14
HMGN1P05114 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.95■□□□□ 0.14
HMGN1P05114 AC009154.2-201ENST00000621177 724 ntBASIC15.95■□□□□ 0.14
HMGN1P05114 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGN1P05114 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
HMGN1P05114 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGN1P05114 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HMGN1P05114 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HMGN1P05114 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HMGN1P05114 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGN1P05114 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HMGN1P05114 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 LYSMD4-203ENST00000378904 2122 ntBASIC15.94■□□□□ 0.14
HMGN1P05114 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGN1P05114 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
HMGN1P05114 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGN1P05114 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGN1P05114 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGN1P05114 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGN1P05114 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGN1P05114 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGN1P05114 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGN1P05114 AL355075.4-201ENST00000554988 638 ntBASIC15.94■□□□□ 0.14
HMGN1P05114 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGN1P05114 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
HMGN1P05114 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGN1P05114 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGN1P05114 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGN1P05114 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HMGN1P05114 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGN1P05114 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
HMGN1P05114 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.93■□□□□ 0.14
HMGN1P05114 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGN1P05114 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HMGN1P05114 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.93■□□□□ 0.14
HMGN1P05114 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGN1P05114 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 FAM87A-204ENST00000613235 858 ntBASIC15.93■□□□□ 0.14
HMGN1P05114 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.93■□□□□ 0.14
HMGN1P05114 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HMGN1P05114 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGN1P05114 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms