Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 AC022898.2-201ENST00000616822 1312 ntBASIC15.84■□□□□ 0.13
HLA-DPB1P04440 AC105020.1-201ENST00000435356 2205 ntBASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 KRT8P7-201ENST00000533003 1432 ntBASIC15.84■□□□□ 0.13
HLA-DPB1P04440 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 AC100803.2-201ENST00000562459 1963 ntBASIC15.84■□□□□ 0.13
HLA-DPB1P04440 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPB1P04440 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
HLA-DPB1P04440 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPB1P04440 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPB1P04440 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPB1P04440 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.83■□□□□ 0.13
HLA-DPB1P04440 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPB1P04440 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPB1P04440 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 AC113347.1-201ENST00000413321 391 ntBASIC15.83■□□□□ 0.12
HLA-DPB1P04440 AL137013.1-201ENST00000432946 1228 ntBASIC15.83■□□□□ 0.12
HLA-DPB1P04440 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 AL512604.3-201ENST00000569583 964 ntBASIC15.83■□□□□ 0.12
HLA-DPB1P04440 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 LINC01451-201ENST00000623792 534 ntBASIC15.83■□□□□ 0.12
HLA-DPB1P04440 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DPB1P04440 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AGGF1P2-201ENST00000426656 2106 ntBASIC15.82■□□□□ 0.12
HLA-DPB1P04440 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 PCDHA14-201ENST00000506751 2298 ntBASIC15.82■□□□□ 0.12
HLA-DPB1P04440 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AC005521.1-201ENST00000393351 872 ntBASIC15.82■□□□□ 0.12
HLA-DPB1P04440 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AC141257.4-201ENST00000634557 245 ntBASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AC136944.6-201ENST00000634818 245 ntBASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AC046158.3-201ENST00000624947 2558 ntBASIC15.82■□□□□ 0.12
HLA-DPB1P04440 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DPB1P04440 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms