Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPS2P32-201ENST00000439199 892 ntBASIC10.84□□□□□ -0.67
APOBP04114 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.84□□□□□ -0.67
APOBP04114 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.84□□□□□ -0.67
APOBP04114 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 GPR53P-205ENST00000457298 1084 ntBASIC10.84□□□□□ -0.67
APOBP04114 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC10.84□□□□□ -0.67
APOBP04114 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 AC004790.1-201ENST00000612686 536 ntBASIC10.84□□□□□ -0.67
APOBP04114 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 AC100757.3-201ENST00000622361 1406 ntBASIC10.84□□□□□ -0.67
APOBP04114 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
APOBP04114 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
APOBP04114 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 AC119751.2-201ENST00000504529 210 ntBASIC10.84□□□□□ -0.67
APOBP04114 STK19B-204ENST00000512515 211 ntBASIC10.84□□□□□ -0.67
APOBP04114 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 AC104794.3-201ENST00000566840 1248 ntBASIC10.84□□□□□ -0.67
APOBP04114 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 AL031598.1-201ENST00000561511 1773 ntBASIC10.83□□□□□ -0.68
APOBP04114 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
APOBP04114 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC10.83□□□□□ -0.68
APOBP04114 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
APOBP04114 AC140658.5-201ENST00000438532 169 ntBASIC10.83□□□□□ -0.68
APOBP04114 ACA64.2-201ENST00000459014 129 ntBASIC10.83□□□□□ -0.68
APOBP04114 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.83□□□□□ -0.68
APOBP04114 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.83□□□□□ -0.68
APOBP04114 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
APOBP04114 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.83□□□□□ -0.68
APOBP04114 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC10.83□□□□□ -0.68
APOBP04114 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC10.83□□□□□ -0.68
APOBP04114 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
APOBP04114 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.83□□□□□ -0.68
APOBP04114 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.83□□□□□ -0.68
APOBP04114 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.83□□□□□ -0.68
APOBP04114 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC10.83□□□□□ -0.68
APOBP04114 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOBP04114 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 IGHV3-71-201ENST00000523324 359 ntBASIC10.82□□□□□ -0.68
APOBP04114 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC10.82□□□□□ -0.68
APOBP04114 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC10.82□□□□□ -0.68
APOBP04114 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC10.82□□□□□ -0.68
APOBP04114 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.82□□□□□ -0.68
APOBP04114 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC10.82□□□□□ -0.68
APOBP04114 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.82□□□□□ -0.68
APOBP04114 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
APOBP04114 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
APOBP04114 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC10.82□□□□□ -0.68
APOBP04114 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC10.82□□□□□ -0.68
APOBP04114 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
APOBP04114 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOBP04114 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms