Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LTAP01374 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LTAP01374 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LTAP01374 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.27□□□□□ -0.29
LTAP01374 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.27□□□□□ -0.29
LTAP01374 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LTAP01374 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LTAP01374 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
LTAP01374 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.26□□□□□ -0.29
LTAP01374 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
LTAP01374 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LTAP01374 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LTAP01374 KRT18P65-201ENST00000439811 1286 ntBASIC13.26□□□□□ -0.29
LTAP01374 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.26□□□□□ -0.29
LTAP01374 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 RPPH1-201ENST00000516869 333 ntBASIC13.26□□□□□ -0.29
LTAP01374 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.26□□□□□ -0.29
LTAP01374 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LTAP01374 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LTAP01374 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.26□□□□□ -0.29
LTAP01374 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LTAP01374 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.26□□□□□ -0.29
LTAP01374 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
LTAP01374 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LTAP01374 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.25□□□□□ -0.29
LTAP01374 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.25□□□□□ -0.29
LTAP01374 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 AC006449.5-201ENST00000610658 2098 ntBASIC13.25□□□□□ -0.29
LTAP01374 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.25□□□□□ -0.29
LTAP01374 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.25□□□□□ -0.29
LTAP01374 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.25□□□□□ -0.29
LTAP01374 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.25□□□□□ -0.29
LTAP01374 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.25□□□□□ -0.29
LTAP01374 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.25□□□□□ -0.29
LTAP01374 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
LTAP01374 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.25□□□□□ -0.29
LTAP01374 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LTAP01374 PCDHA1-201ENST00000378133 2726 ntBASIC13.25□□□□□ -0.29
LTAP01374 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LTAP01374 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LTAP01374 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LTAP01374 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LTAP01374 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LTAP01374 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms