Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
GGPS1O95749 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 KRT18P55-202ENST00000578578 1546 ntBASIC19.71■□□□□ 0.75
GGPS1O95749 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GGPS1O95749 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.71■□□□□ 0.75
GGPS1O95749 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 ELK2BP-201ENST00000415014 1224 ntBASIC19.71■□□□□ 0.75
GGPS1O95749 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 AC007967.2-201ENST00000432613 625 ntBASIC19.71■□□□□ 0.75
GGPS1O95749 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.71■□□□□ 0.75
GGPS1O95749 STK19B-204ENST00000512515 211 ntBASIC19.71■□□□□ 0.75
GGPS1O95749 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.71■□□□□ 0.75
GGPS1O95749 PGM5P2-202ENST00000637225 1043 ntBASIC19.71■□□□□ 0.75
GGPS1O95749 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GGPS1O95749 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GGPS1O95749 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.74
GGPS1O95749 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
GGPS1O95749 AC006504.4-201ENST00000592118 1568 ntBASIC19.7■□□□□ 0.74
GGPS1O95749 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.7■□□□□ 0.74
GGPS1O95749 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GGPS1O95749 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 NCF1C-201ENST00000438382 1427 ntBASIC19.7■□□□□ 0.74
GGPS1O95749 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GGPS1O95749 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.7■□□□□ 0.74
GGPS1O95749 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GGPS1O95749 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.7■□□□□ 0.74
GGPS1O95749 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.7■□□□□ 0.74
GGPS1O95749 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.7■□□□□ 0.74
GGPS1O95749 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.7■□□□□ 0.74
GGPS1O95749 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.7■□□□□ 0.74
GGPS1O95749 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.7■□□□□ 0.74
GGPS1O95749 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
GGPS1O95749 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.7■□□□□ 0.74
GGPS1O95749 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.7■□□□□ 0.74
GGPS1O95749 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
GGPS1O95749 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.7■□□□□ 0.74
GGPS1O95749 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GGPS1O95749 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GGPS1O95749 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GGPS1O95749 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
GGPS1O95749 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GGPS1O95749 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.69■□□□□ 0.74
GGPS1O95749 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GGPS1O95749 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GGPS1O95749 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GGPS1O95749 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GGPS1O95749 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.69■□□□□ 0.74
GGPS1O95749 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.69■□□□□ 0.74
GGPS1O95749 AC108751.1-201ENST00000490852 363 ntBASIC19.69■□□□□ 0.74
GGPS1O95749 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GGPS1O95749 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.69■□□□□ 0.74
GGPS1O95749 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.69■□□□□ 0.74
GGPS1O95749 AL139424.1-201ENST00000607572 797 ntBASIC19.69■□□□□ 0.74
GGPS1O95749 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GGPS1O95749 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.69■□□□□ 0.74
GGPS1O95749 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
GGPS1O95749 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GGPS1O95749 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.69■□□□□ 0.74
GGPS1O95749 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GGPS1O95749 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms