Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC26.08■■□□□ 1.77
RAPGEF3O95398 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
RAPGEF3O95398 KRT8P23-201ENST00000560090 1207 ntBASIC26.08■■□□□ 1.77
RAPGEF3O95398 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
RAPGEF3O95398 AC005332.7-201ENST00000614046 2005 ntBASIC26.08■■□□□ 1.77
RAPGEF3O95398 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RAPGEF3O95398 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 SPTLC1P1-201ENST00000447199 261 ntBASIC26.07■■□□□ 1.76
RAPGEF3O95398 KRT17P7-201ENST00000451704 1104 ntBASIC26.07■■□□□ 1.76
RAPGEF3O95398 TMPRSS11CP-201ENST00000453277 683 ntBASIC26.07■■□□□ 1.76
RAPGEF3O95398 AC002558.1-201ENST00000488906 803 ntBASIC26.07■■□□□ 1.76
RAPGEF3O95398 HILS1-202ENST00000545329 423 ntBASIC26.07■■□□□ 1.76
RAPGEF3O95398 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 AC010336.2-201ENST00000564226 506 ntBASIC26.07■■□□□ 1.76
RAPGEF3O95398 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 IFT20-216ENST00000588477 774 ntTSL 5 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC26.07■■□□□ 1.76
RAPGEF3O95398 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RAPGEF3O95398 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RAPGEF3O95398 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
RAPGEF3O95398 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RAPGEF3O95398 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RAPGEF3O95398 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RAPGEF3O95398 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RAPGEF3O95398 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 CD81-202ENST00000381036 880 ntTSL 3 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RAPGEF3O95398 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC26.06■■□□□ 1.76
RAPGEF3O95398 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RAPGEF3O95398 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 ALG1L8P-201ENST00000533887 760 ntBASIC26.05■■□□□ 1.76
RAPGEF3O95398 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 SSH2-211ENST00000590153 570 ntTSL 4 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC26.05■■□□□ 1.76
RAPGEF3O95398 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF3O95398 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF3O95398 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF3O95398 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF3O95398 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF3O95398 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 MMP17-203ENST00000535004 719 ntTSL 3 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF3O95398 AL590560.3-201ENST00000623350 461 ntBASIC26.04■■□□□ 1.76
RAPGEF3O95398 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 AC100757.3-201ENST00000622361 1406 ntBASIC26.04■■□□□ 1.76
RAPGEF3O95398 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC26.04■■□□□ 1.76
RAPGEF3O95398 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC26.03■■□□□ 1.76
RAPGEF3O95398 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
RAPGEF3O95398 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF3O95398 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC26.03■■□□□ 1.76
RAPGEF3O95398 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
RAPGEF3O95398 MIR4453-201ENST00000584019 89 ntBASIC26.03■■□□□ 1.76
RAPGEF3O95398 COQ4-205ENST00000609948 956 ntTSL 2 BASIC26.03■■□□□ 1.76
RAPGEF3O95398 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC26.03■■□□□ 1.76
RAPGEF3O95398 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF3O95398 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms