Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LTN1O94822 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.07■■□□□ 1.28
LTN1O94822 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC23.07■■□□□ 1.28
LTN1O94822 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC23.07■■□□□ 1.28
LTN1O94822 AL096865.1-201ENST00000606796 927 ntBASIC23.07■■□□□ 1.28
LTN1O94822 Z92544.3-201ENST00000624747 417 ntBASIC23.07■■□□□ 1.28
LTN1O94822 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
LTN1O94822 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.07■■□□□ 1.28
LTN1O94822 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
LTN1O94822 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
LTN1O94822 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LTN1O94822 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.06■■□□□ 1.28
LTN1O94822 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC23.06■■□□□ 1.28
LTN1O94822 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC23.06■■□□□ 1.28
LTN1O94822 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
LTN1O94822 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC23.06■■□□□ 1.28
LTN1O94822 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC23.06■■□□□ 1.28
LTN1O94822 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC23.06■■□□□ 1.28
LTN1O94822 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
LTN1O94822 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC23.06■■□□□ 1.28
LTN1O94822 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.06■■□□□ 1.28
LTN1O94822 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
LTN1O94822 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC23.06■■□□□ 1.28
LTN1O94822 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
LTN1O94822 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.06■■□□□ 1.28
LTN1O94822 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC23.06■■□□□ 1.28
LTN1O94822 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LTN1O94822 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC23.05■■□□□ 1.28
LTN1O94822 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.05■■□□□ 1.28
LTN1O94822 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
LTN1O94822 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC23.05■■□□□ 1.28
LTN1O94822 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.05■■□□□ 1.28
LTN1O94822 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
LTN1O94822 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
LTN1O94822 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LTN1O94822 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.05■■□□□ 1.28
LTN1O94822 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC23.05■■□□□ 1.28
LTN1O94822 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
LTN1O94822 LYSMD4-203ENST00000378904 2122 ntBASIC23.04■■□□□ 1.28
LTN1O94822 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LTN1O94822 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
LTN1O94822 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LTN1O94822 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LTN1O94822 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LTN1O94822 SLC25A1P3-201ENST00000395415 828 ntBASIC23.04■■□□□ 1.28
LTN1O94822 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC23.04■■□□□ 1.28
LTN1O94822 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC23.04■■□□□ 1.28
LTN1O94822 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
LTN1O94822 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LTN1O94822 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LTN1O94822 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LTN1O94822 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.03■■□□□ 1.28
LTN1O94822 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC23.03■■□□□ 1.28
LTN1O94822 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LTN1O94822 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms