Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
ZNF253O75346 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF253O75346 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF253O75346 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF253O75346 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ZNF253O75346 KRT18P29-201ENST00000397031 1267 ntBASIC13.75□□□□□ -0.21
ZNF253O75346 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF253O75346 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF253O75346 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.75□□□□□ -0.21
ZNF253O75346 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.75□□□□□ -0.21
ZNF253O75346 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF253O75346 AP003041.3-201ENST00000527151 707 ntBASIC13.75□□□□□ -0.21
ZNF253O75346 BX088651.1-201ENST00000540551 451 ntBASIC13.75□□□□□ -0.21
ZNF253O75346 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF253O75346 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF253O75346 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ZNF253O75346 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZNF253O75346 AL049637.2-201ENST00000641778 930 ntBASIC13.75□□□□□ -0.21
ZNF253O75346 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
ZNF253O75346 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZNF253O75346 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZNF253O75346 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF253O75346 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF253O75346 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
ZNF253O75346 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ZNF253O75346 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ZNF253O75346 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
ZNF253O75346 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
ZNF253O75346 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ZNF253O75346 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF253O75346 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ZNF253O75346 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF253O75346 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF253O75346 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 AC022898.2-201ENST00000616822 1312 ntBASIC13.74□□□□□ -0.21
ZNF253O75346 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
ZNF253O75346 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ZNF253O75346 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
ZNF253O75346 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF253O75346 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.74□□□□□ -0.21
ZNF253O75346 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF253O75346 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF253O75346 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF253O75346 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF253O75346 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF253O75346 AC092338.2-201ENST00000568827 1415 ntBASIC13.73□□□□□ -0.21
ZNF253O75346 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF253O75346 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ZNF253O75346 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF253O75346 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF253O75346 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF253O75346 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ZNF253O75346 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF253O75346 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF253O75346 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms