Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.63■□□□□ 0.57
CILPO75339 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.63■□□□□ 0.57
CILPO75339 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.63■□□□□ 0.57
CILPO75339 AL020989.1-201ENST00000422979 469 ntBASIC18.63■□□□□ 0.57
CILPO75339 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.63■□□□□ 0.57
CILPO75339 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.63■□□□□ 0.57
CILPO75339 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CILPO75339 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CILPO75339 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CILPO75339 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CILPO75339 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.63■□□□□ 0.57
CILPO75339 AC046185.3-201ENST00000623228 1824 ntBASIC18.63■□□□□ 0.57
CILPO75339 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
CILPO75339 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.62■□□□□ 0.57
CILPO75339 PP12613-201ENST00000424958 2230 ntBASIC18.62■□□□□ 0.57
CILPO75339 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
CILPO75339 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 AC004870.1-201ENST00000315132 882 ntBASIC18.62■□□□□ 0.57
CILPO75339 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.62■□□□□ 0.57
CILPO75339 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.62■□□□□ 0.57
CILPO75339 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CILPO75339 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 AL139288.1-201ENST00000623748 933 ntBASIC18.62■□□□□ 0.57
CILPO75339 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.62■□□□□ 0.57
CILPO75339 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.62■□□□□ 0.57
CILPO75339 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CILPO75339 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CILPO75339 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.61■□□□□ 0.57
CILPO75339 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 AL356309.3-201ENST00000624132 1934 ntBASIC18.61■□□□□ 0.57
CILPO75339 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.61■□□□□ 0.57
CILPO75339 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.61■□□□□ 0.57
CILPO75339 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CILPO75339 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CILPO75339 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.61■□□□□ 0.57
CILPO75339 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.61■□□□□ 0.57
CILPO75339 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.61■□□□□ 0.57
CILPO75339 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CILPO75339 NKAPP1-205ENST00000585790 367 ntBASIC18.61■□□□□ 0.57
CILPO75339 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CILPO75339 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.61■□□□□ 0.57
CILPO75339 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CILPO75339 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.61■□□□□ 0.57
CILPO75339 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.6■□□□□ 0.57
CILPO75339 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.6■□□□□ 0.57
CILPO75339 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CILPO75339 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CILPO75339 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CILPO75339 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.6■□□□□ 0.57
CILPO75339 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CILPO75339 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.6■□□□□ 0.57
CILPO75339 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CILPO75339 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CILPO75339 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CILPO75339 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CILPO75339 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CILPO75339 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms