Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM13O60858 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 TSPY15P-201ENST00000457163 923 ntBASIC17.33■□□□□ 0.36
TRIM13O60858 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM13O60858 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM13O60858 GCSHP2-201ENST00000560971 527 ntBASIC17.33■□□□□ 0.36
TRIM13O60858 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.33■□□□□ 0.36
TRIM13O60858 AC004263.2-201ENST00000617183 678 ntBASIC17.33■□□□□ 0.36
TRIM13O60858 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM13O60858 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TRIM13O60858 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
TRIM13O60858 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.33■□□□□ 0.36
TRIM13O60858 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRIM13O60858 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRIM13O60858 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM13O60858 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TRIM13O60858 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM13O60858 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM13O60858 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM13O60858 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM13O60858 TSPY12P-201ENST00000421279 868 ntBASIC17.32■□□□□ 0.36
TRIM13O60858 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
TRIM13O60858 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM13O60858 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM13O60858 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.32■□□□□ 0.36
TRIM13O60858 AC141257.4-201ENST00000634557 245 ntBASIC17.32■□□□□ 0.36
TRIM13O60858 AC136944.6-201ENST00000634818 245 ntBASIC17.32■□□□□ 0.36
TRIM13O60858 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 AL391807.1-203ENST00000604392 2365 ntBASIC17.32■□□□□ 0.36
TRIM13O60858 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TRIM13O60858 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM13O60858 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM13O60858 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM13O60858 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
TRIM13O60858 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM13O60858 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM13O60858 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM13O60858 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM13O60858 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.31■□□□□ 0.36
TRIM13O60858 AP006294.2-201ENST00000641667 209 ntBASIC17.31■□□□□ 0.36
TRIM13O60858 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRIM13O60858 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM13O60858 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM13O60858 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM13O60858 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM13O60858 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM13O60858 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM13O60858 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM13O60858 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM13O60858 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM13O60858 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM13O60858 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms