Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.48■□□□□ 0.23
HCN1O60741 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HCN1O60741 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.48■□□□□ 0.23
HCN1O60741 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HCN1O60741 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HCN1O60741 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HCN1O60741 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.47■□□□□ 0.23
HCN1O60741 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.47■□□□□ 0.23
HCN1O60741 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 AC084018.2-201ENST00000613093 2607 ntBASIC16.47■□□□□ 0.23
HCN1O60741 KRT18P55-202ENST00000578578 1546 ntBASIC16.47■□□□□ 0.23
HCN1O60741 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.47■□□□□ 0.23
HCN1O60741 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.47■□□□□ 0.23
HCN1O60741 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.47■□□□□ 0.23
HCN1O60741 RN7SL606P-201ENST00000472779 293 ntBASIC16.47■□□□□ 0.23
HCN1O60741 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.47■□□□□ 0.23
HCN1O60741 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.47■□□□□ 0.23
HCN1O60741 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.47■□□□□ 0.23
HCN1O60741 AC111152.3-201ENST00000569699 673 ntBASIC16.47■□□□□ 0.23
HCN1O60741 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 AL592071.1-201ENST00000611956 408 ntBASIC16.47■□□□□ 0.23
HCN1O60741 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HCN1O60741 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.47■□□□□ 0.23
HCN1O60741 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.47■□□□□ 0.23
HCN1O60741 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
HCN1O60741 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HCN1O60741 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HCN1O60741 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HCN1O60741 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.47■□□□□ 0.23
HCN1O60741 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.47■□□□□ 0.23
HCN1O60741 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCN1O60741 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.46■□□□□ 0.23
HCN1O60741 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HCN1O60741 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HCN1O60741 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 AC104819.1-201ENST00000504587 486 ntBASIC16.46■□□□□ 0.23
HCN1O60741 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.46■□□□□ 0.23
HCN1O60741 AL121772.3-201ENST00000610840 674 ntBASIC16.46■□□□□ 0.23
HCN1O60741 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 AC124864.1-201ENST00000623408 392 ntBASIC16.46■□□□□ 0.23
HCN1O60741 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.46■□□□□ 0.23
HCN1O60741 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCN1O60741 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HCN1O60741 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
HCN1O60741 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
HCN1O60741 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.45■□□□□ 0.22
HCN1O60741 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 LINC01126-201ENST00000623515 1646 ntBASIC16.45■□□□□ 0.22
HCN1O60741 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms