Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MSI1O43347 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.26■□□□□ 0.51
MSI1O43347 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.26■□□□□ 0.51
MSI1O43347 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.26■□□□□ 0.51
MSI1O43347 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
MSI1O43347 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MSI1O43347 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.26■□□□□ 0.51
MSI1O43347 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.26■□□□□ 0.51
MSI1O43347 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
MSI1O43347 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.25■□□□□ 0.51
MSI1O43347 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MSI1O43347 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 AC005332.8-201ENST00000622750 2735 ntBASIC18.25■□□□□ 0.51
MSI1O43347 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
MSI1O43347 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MSI1O43347 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 AC079776.2-201ENST00000641154 1609 ntBASIC18.25■□□□□ 0.51
MSI1O43347 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.25■□□□□ 0.51
MSI1O43347 KLF4P1-201ENST00000412782 1185 ntBASIC18.25■□□□□ 0.51
MSI1O43347 SPDYE21P-201ENST00000413323 827 ntBASIC18.25■□□□□ 0.51
MSI1O43347 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 AC005104.2-201ENST00000427818 678 ntBASIC18.25■□□□□ 0.51
MSI1O43347 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.25■□□□□ 0.51
MSI1O43347 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MSI1O43347 AC002558.1-201ENST00000488906 803 ntBASIC18.25■□□□□ 0.51
MSI1O43347 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MSI1O43347 AC021087.4-201ENST00000563761 564 ntBASIC18.25■□□□□ 0.51
MSI1O43347 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.25■□□□□ 0.51
MSI1O43347 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.25■□□□□ 0.51
MSI1O43347 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MSI1O43347 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.25■□□□□ 0.51
MSI1O43347 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MSI1O43347 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.24■□□□□ 0.51
MSI1O43347 KRT18P67-201ENST00000432816 1264 ntBASIC18.24■□□□□ 0.51
MSI1O43347 SCARNA2-201ENST00000458748 420 ntBASIC18.24■□□□□ 0.51
MSI1O43347 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 IGHV3-52-201ENST00000519770 353 ntBASIC18.24■□□□□ 0.51
MSI1O43347 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.24■□□□□ 0.51
MSI1O43347 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.24■□□□□ 0.51
MSI1O43347 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.24■□□□□ 0.51
MSI1O43347 AL139288.1-201ENST00000623748 933 ntBASIC18.24■□□□□ 0.51
MSI1O43347 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.24■□□□□ 0.51
MSI1O43347 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
MSI1O43347 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MSI1O43347 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MSI1O43347 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
MSI1O43347 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
MSI1O43347 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MSI1O43347 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.23■□□□□ 0.51
MSI1O43347 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.23■□□□□ 0.51
MSI1O43347 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MSI1O43347 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms