Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.81■□□□□ 0.6
SPTLC1O15269 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.81■□□□□ 0.6
SPTLC1O15269 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.81■□□□□ 0.6
SPTLC1O15269 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.81■□□□□ 0.6
SPTLC1O15269 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.81■□□□□ 0.6
SPTLC1O15269 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 STK25P1-201ENST00000585406 838 ntBASIC18.81■□□□□ 0.6
SPTLC1O15269 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.81■□□□□ 0.6
SPTLC1O15269 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
SPTLC1O15269 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPTLC1O15269 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPTLC1O15269 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.8■□□□□ 0.6
SPTLC1O15269 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.8■□□□□ 0.6
SPTLC1O15269 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPTLC1O15269 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPTLC1O15269 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPTLC1O15269 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPTLC1O15269 AC005104.2-201ENST00000427818 678 ntBASIC18.8■□□□□ 0.6
SPTLC1O15269 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.8■□□□□ 0.6
SPTLC1O15269 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.8■□□□□ 0.6
SPTLC1O15269 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.8■□□□□ 0.6
SPTLC1O15269 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.8■□□□□ 0.6
SPTLC1O15269 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.8■□□□□ 0.6
SPTLC1O15269 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.8■□□□□ 0.6
SPTLC1O15269 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.8■□□□□ 0.6
SPTLC1O15269 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.8■□□□□ 0.6
SPTLC1O15269 AL022326.1-202ENST00000641533 845 ntBASIC18.8■□□□□ 0.6
SPTLC1O15269 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SPTLC1O15269 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPTLC1O15269 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SPTLC1O15269 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPTLC1O15269 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPTLC1O15269 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPTLC1O15269 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SPTLC1O15269 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.8■□□□□ 0.6
SPTLC1O15269 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.79■□□□□ 0.6
SPTLC1O15269 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.79■□□□□ 0.6
SPTLC1O15269 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SPTLC1O15269 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPTLC1O15269 AC008764.6-201ENST00000595909 2069 ntBASIC18.79■□□□□ 0.6
SPTLC1O15269 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPTLC1O15269 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.79■□□□□ 0.6
SPTLC1O15269 AL020989.1-201ENST00000422979 469 ntBASIC18.79■□□□□ 0.6
SPTLC1O15269 AC002558.1-201ENST00000488906 803 ntBASIC18.79■□□□□ 0.6
SPTLC1O15269 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPTLC1O15269 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.79■□□□□ 0.6
SPTLC1O15269 AC116407.3-201ENST00000623905 1129 ntBASIC18.79■□□□□ 0.6
SPTLC1O15269 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPTLC1O15269 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SPTLC1O15269 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.78■□□□□ 0.6
SPTLC1O15269 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SPTLC1O15269 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.78■□□□□ 0.6
SPTLC1O15269 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTLC1O15269 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SPTLC1O15269 PRYP5-201ENST00000451909 266 ntBASIC18.78■□□□□ 0.6
SPTLC1O15269 SLC25A1P1-201ENST00000528351 927 ntBASIC18.78■□□□□ 0.6
SPTLC1O15269 OR7E14P-202ENST00000530490 1290 ntBASIC18.78■□□□□ 0.6
SPTLC1O15269 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.78■□□□□ 0.6
SPTLC1O15269 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.78■□□□□ 0.6
SPTLC1O15269 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.78■□□□□ 0.6
SPTLC1O15269 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.78■□□□□ 0.6
SPTLC1O15269 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SPTLC1O15269 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.78■□□□□ 0.6
SPTLC1O15269 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms