Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC29.76■■■□□ 2.35
CUX2O14529 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC29.76■■■□□ 2.35
CUX2O14529 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CUX2O14529 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC29.76■■■□□ 2.35
CUX2O14529 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC29.75■■■□□ 2.35
CUX2O14529 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC29.75■■■□□ 2.35
CUX2O14529 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC29.75■■■□□ 2.35
CUX2O14529 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CUX2O14529 CD81-202ENST00000381036 880 ntTSL 3 BASIC29.75■■■□□ 2.35
CUX2O14529 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC29.75■■■□□ 2.35
CUX2O14529 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC29.75■■■□□ 2.35
CUX2O14529 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC29.75■■■□□ 2.35
CUX2O14529 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC29.75■■■□□ 2.35
CUX2O14529 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CUX2O14529 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC29.75■■■□□ 2.35
CUX2O14529 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC29.75■■■□□ 2.35
CUX2O14529 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC29.75■■■□□ 2.35
CUX2O14529 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CUX2O14529 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CUX2O14529 AL049757.1-201ENST00000616842 1596 ntBASIC29.75■■■□□ 2.35
CUX2O14529 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
CUX2O14529 FUT8-AS1-201ENST00000621019 1521 ntBASIC29.75■■■□□ 2.35
CUX2O14529 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CUX2O14529 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
CUX2O14529 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
CUX2O14529 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CUX2O14529 TPI1-206ENST00000488464 791 ntTSL 5 BASIC29.74■■■□□ 2.35
CUX2O14529 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CUX2O14529 AC104794.3-201ENST00000566840 1248 ntBASIC29.74■■■□□ 2.35
CUX2O14529 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
CUX2O14529 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
CUX2O14529 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CUX2O14529 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CUX2O14529 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CUX2O14529 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
CUX2O14529 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
CUX2O14529 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 LY6E-204ENST00000519546 971 ntTSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 RN7SL190P-201ENST00000582519 257 ntBASIC29.74■■■□□ 2.35
CUX2O14529 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC29.74■■■□□ 2.35
CUX2O14529 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC29.73■■■□□ 2.35
CUX2O14529 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CUX2O14529 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC29.73■■■□□ 2.35
CUX2O14529 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CUX2O14529 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
CUX2O14529 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CUX2O14529 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CUX2O14529 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
CUX2O14529 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
CUX2O14529 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CUX2O14529 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC29.73■■■□□ 2.35
CUX2O14529 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CUX2O14529 RPL28-204ENST00000431533 590 ntTSL 2 BASIC29.73■■■□□ 2.35
CUX2O14529 KRT223P-202ENST00000449164 1292 ntBASIC29.73■■■□□ 2.35
CUX2O14529 AC009477.1-201ENST00000452936 217 ntBASIC29.73■■■□□ 2.35
CUX2O14529 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC29.73■■■□□ 2.35
CUX2O14529 PFAS-212ENST00000625942 396 ntTSL 5 BASIC29.73■■■□□ 2.35
CUX2O14529 COX11-210ENST00000639671 696 ntBASIC29.73■■■□□ 2.35
CUX2O14529 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CUX2O14529 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
CUX2O14529 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CUX2O14529 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CUX2O14529 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC29.72■■■□□ 2.35
CUX2O14529 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CUX2O14529 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CUX2O14529 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC29.72■■■□□ 2.35
CUX2O14529 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CUX2O14529 MYCLP1-201ENST00000372451 1075 ntBASIC29.72■■■□□ 2.35
CUX2O14529 DGCR5-201ENST00000399539 862 ntBASIC29.72■■■□□ 2.35
CUX2O14529 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CUX2O14529 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC29.72■■■□□ 2.35
CUX2O14529 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC29.72■■■□□ 2.35
CUX2O14529 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC29.72■■■□□ 2.35
CUX2O14529 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC29.71■■■□□ 2.35
CUX2O14529 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
CUX2O14529 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
CUX2O14529 AL353779.1-201ENST00000434793 351 ntBASIC29.71■■■□□ 2.35
CUX2O14529 AP005482.1-201ENST00000563722 1273 ntBASIC29.71■■■□□ 2.35
CUX2O14529 GPR182-203ENST00000622922 591 ntBASIC29.71■■■□□ 2.35
CUX2O14529 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC29.71■■■□□ 2.35
CUX2O14529 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC29.71■■■□□ 2.35
CUX2O14529 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CUX2O14529 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CUX2O14529 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC29.7■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms