Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC138932.1-201ENST00000534164 6830 ntBASIC18.54■□□□□ 0.56
CLDN5O00501 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN5O00501 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN5O00501 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN5O00501 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN5O00501 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN5O00501 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN5O00501 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN5O00501 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN5O00501 STK19B-204ENST00000512515 211 ntBASIC18.54■□□□□ 0.56
CLDN5O00501 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN5O00501 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.54■□□□□ 0.56
CLDN5O00501 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN5O00501 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN5O00501 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN5O00501 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN5O00501 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN5O00501 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN5O00501 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CLDN5O00501 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 HTR7P1-202ENST00000624664 4411 ntBASIC18.53■□□□□ 0.56
CLDN5O00501 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN5O00501 AL020989.1-201ENST00000422979 469 ntBASIC18.53■□□□□ 0.56
CLDN5O00501 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN5O00501 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 AP001005.1-201ENST00000571755 1248 ntBASIC18.53■□□□□ 0.56
CLDN5O00501 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN5O00501 SIGLEC16-201ENST00000599858 1437 ntBASIC18.53■□□□□ 0.56
CLDN5O00501 AC064862.7-201ENST00000604520 867 ntBASIC18.53■□□□□ 0.56
CLDN5O00501 MIR7706-201ENST00000613747 67 ntBASIC18.53■□□□□ 0.56
CLDN5O00501 FAM215A-202ENST00000632077 792 ntBASIC18.53■□□□□ 0.56
CLDN5O00501 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN5O00501 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN5O00501 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN5O00501 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN5O00501 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN5O00501 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN5O00501 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN5O00501 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN5O00501 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN5O00501 AC003669.1-201ENST00000334569 611 ntBASIC18.52■□□□□ 0.56
CLDN5O00501 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN5O00501 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.52■□□□□ 0.56
CLDN5O00501 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN5O00501 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN5O00501 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN5O00501 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLDN5O00501 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN5O00501 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN5O00501 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.52■□□□□ 0.56
CLDN5O00501 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLDN5O00501 AL022326.1-202ENST00000641533 845 ntBASIC18.52■□□□□ 0.56
CLDN5O00501 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CLDN5O00501 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN5O00501 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN5O00501 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CLDN5O00501 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CLDN5O00501 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLDN5O00501 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN5O00501 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN5O00501 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLDN5O00501 AC012640.2-201ENST00000561606 901 ntBASIC18.51■□□□□ 0.55
CLDN5O00501 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN5O00501 LINC01451-201ENST00000623792 534 ntBASIC18.51■□□□□ 0.55
CLDN5O00501 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLDN5O00501 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms