Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.8■□□□□ 0.28
RTCAO00442 NSUN5P1-202ENST00000421140 1535 ntBASIC16.8■□□□□ 0.28
RTCAO00442 NSUN5P2-203ENST00000457352 1529 ntBASIC16.8■□□□□ 0.28
RTCAO00442 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.8■□□□□ 0.28
RTCAO00442 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.8■□□□□ 0.28
RTCAO00442 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTCAO00442 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.79■□□□□ 0.28
RTCAO00442 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.79■□□□□ 0.28
RTCAO00442 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTCAO00442 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTCAO00442 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RTCAO00442 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RTCAO00442 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
RTCAO00442 IGHV3-47-201ENST00000425060 335 ntBASIC16.79■□□□□ 0.28
RTCAO00442 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.79■□□□□ 0.28
RTCAO00442 MINOS1P3-201ENST00000457048 203 ntBASIC16.79■□□□□ 0.28
RTCAO00442 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RTCAO00442 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.79■□□□□ 0.28
RTCAO00442 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.79■□□□□ 0.28
RTCAO00442 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.79■□□□□ 0.28
RTCAO00442 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RTCAO00442 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTCAO00442 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.79■□□□□ 0.28
RTCAO00442 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RTCAO00442 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTCAO00442 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.79■□□□□ 0.28
RTCAO00442 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.79■□□□□ 0.28
RTCAO00442 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTCAO00442 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTCAO00442 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RTCAO00442 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTCAO00442 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RTCAO00442 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RTCAO00442 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.78■□□□□ 0.28
RTCAO00442 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 AL645608.8-201ENST00000606034 2086 ntBASIC16.78■□□□□ 0.28
RTCAO00442 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.78■□□□□ 0.28
RTCAO00442 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.78■□□□□ 0.28
RTCAO00442 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.78■□□□□ 0.28
RTCAO00442 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.78■□□□□ 0.28
RTCAO00442 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.78■□□□□ 0.28
RTCAO00442 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.78■□□□□ 0.28
RTCAO00442 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RTCAO00442 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RTCAO00442 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.78■□□□□ 0.28
RTCAO00442 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.78■□□□□ 0.28
RTCAO00442 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RTCAO00442 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RTCAO00442 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RTCAO00442 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTCAO00442 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
RTCAO00442 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RTCAO00442 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.77■□□□□ 0.28
RTCAO00442 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.77■□□□□ 0.28
RTCAO00442 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RTCAO00442 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 CROCCP2-202ENST00000412962 2773 ntBASIC16.77■□□□□ 0.28
RTCAO00442 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.77■□□□□ 0.28
RTCAO00442 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.77■□□□□ 0.28
RTCAO00442 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RTCAO00442 AC104819.1-201ENST00000504587 486 ntBASIC16.77■□□□□ 0.28
RTCAO00442 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.77■□□□□ 0.28
RTCAO00442 AC096582.2-201ENST00000510860 516 ntBASIC16.77■□□□□ 0.28
RTCAO00442 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 BNIP3P18-201ENST00000593976 575 ntBASIC16.77■□□□□ 0.28
RTCAO00442 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTCAO00442 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms