Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NOC2LP1-202ENST00000452600 2235 ntBASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA3F8WFD2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 AC018712.1-201ENST00000455767 687 ntBASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA3F8WFD2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 RPS2P28-201ENST00000314255 741 ntBASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 FAM220CP-201ENST00000395253 831 ntBASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 AL049840.3-201ENST00000602669 611 ntBASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA3F8WFD2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPA3F8WFD2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
NPIPA3F8WFD2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPA3F8WFD2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPA3F8WFD2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPA3F8WFD2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPA3F8WFD2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms