Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 AF228730.7-201ENST00000641842 219 ntBASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 AC018470.1-201ENST00000624790 3129 ntBASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA2E9PIF3 NOC2LP1-202ENST00000452600 2235 ntBASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NPIPA2E9PIF3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 AC018712.1-201ENST00000455767 687 ntBASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPA2E9PIF3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPA2E9PIF3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms