Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC023511.2-201ENST00000618803 211 ntBASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.59■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.58■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.58■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MIR940-201ENST00000401276 94 ntBASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 UNC93B6-202ENST00000528242 690 ntBASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC027601.4-201ENST00000611259 610 ntBASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.58■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PMS2P7-201ENST00000506558 1336 ntBASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC073621.1-201ENST00000392730 636 ntBASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MED15P5-201ENST00000423150 992 ntBASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AL591424.1-201ENST00000442569 1213 ntBASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 POLD2P1-201ENST00000511220 997 ntBASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.57■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms