Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTL1A6NKG5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
RTL1A6NKG5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTL1A6NKG5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 STOM-202ENST00000347359 870 ntTSL 2 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 FAM58CP-201ENST00000435741 640 ntBASIC23.17■■□□□ 1.3
RTL1A6NKG5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 TK1-204ENST00000590430 683 ntTSL 3 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 AC007064.4-201ENST00000637740 555 ntBASIC23.17■■□□□ 1.3
RTL1A6NKG5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL1A6NKG5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC23.17■■□□□ 1.3
RTL1A6NKG5 AC025580.3-201ENST00000617932 1424 ntBASIC23.16■■□□□ 1.3
RTL1A6NKG5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 ACTL9-202ENST00000612068 1252 ntBASIC23.16■■□□□ 1.3
RTL1A6NKG5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 AC138028.4-201ENST00000564984 1845 ntBASIC23.16■■□□□ 1.3
RTL1A6NKG5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RTL1A6NKG5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTL1A6NKG5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL1A6NKG5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL1A6NKG5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 ADH5P3-201ENST00000433842 1137 ntBASIC23.15■■□□□ 1.3
RTL1A6NKG5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL1A6NKG5 CEND1P1-201ENST00000451006 455 ntBASIC23.15■■□□□ 1.3
RTL1A6NKG5 AC074386.1-202ENST00000463561 864 ntBASIC23.15■■□□□ 1.3
RTL1A6NKG5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 AL139327.4-201ENST00000612362 153 ntBASIC23.15■■□□□ 1.3
RTL1A6NKG5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL1A6NKG5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL1A6NKG5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL1A6NKG5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL1A6NKG5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTL1A6NKG5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.15■■□□□ 1.3
RTL1A6NKG5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 AC087163.2-201ENST00000457299 853 ntBASIC23.14■■□□□ 1.3
RTL1A6NKG5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 CYMP-203ENST00000474680 1263 ntBASIC23.14■■□□□ 1.3
RTL1A6NKG5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
RTL1A6NKG5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTL1A6NKG5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTL1A6NKG5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms