Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 AC087163.2-201ENST00000457299 853 ntBASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 AC140912.1-201ENST00000577171 1054 ntBASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 AC093677.2-201ENST00000600169 1863 ntBASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM88BA6NKF7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 AL353779.1-201ENST00000434793 351 ntBASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 MIR4515-201ENST00000584082 81 ntBASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 AC007541.1-201ENST00000570282 1469 ntBASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM88BA6NKF7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AC100803.2-201ENST00000562459 1963 ntBASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AC093010.1-201ENST00000473625 1624 ntBASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AC112492.5-201ENST00000421897 457 ntBASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 API5-211ENST00000534695 560 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 MIR4525-201ENST00000580000 75 ntBASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 AL133338.1-201ENST00000565695 1517 ntBASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms