Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 GUSBP12-201ENST00000513727 720 ntBASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 AL136038.3-201ENST00000561909 1096 ntBASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 LINC01238-205ENST00000567549 1107 ntBASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 AC011498.5-201ENST00000592027 486 ntBASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 AL139327.4-201ENST00000612362 153 ntBASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 AC060834.1-201ENST00000443027 2032 ntBASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 AC097374.2-201ENST00000618617 1306 ntBASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 AC091607.1-201ENST00000490318 1060 ntBASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 AC019129.2-201ENST00000609837 1235 ntBASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 AC084018.2-201ENST00000613093 2607 ntBASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM49BA6NDI0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 AC125634.1-201ENST00000438758 1403 ntBASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 AL353801.3-201ENST00000609898 542 ntBASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM49BA6NDI0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms