Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
HFM1A2PYH4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HFM1A2PYH4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HFM1A2PYH4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HFM1A2PYH4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HFM1A2PYH4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 AL591424.1-201ENST00000442569 1213 ntBASIC25.83■■□□□ 1.73
HFM1A2PYH4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HFM1A2PYH4 PAWRP1-201ENST00000451083 565 ntBASIC25.83■■□□□ 1.73
HFM1A2PYH4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HFM1A2PYH4 OR7E47P-204ENST00000575924 449 ntBASIC25.83■■□□□ 1.73
HFM1A2PYH4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC25.83■■□□□ 1.73
HFM1A2PYH4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HFM1A2PYH4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
HFM1A2PYH4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC25.83■■□□□ 1.72
HFM1A2PYH4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
HFM1A2PYH4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HFM1A2PYH4 IGLL3P-201ENST00000412472 434 ntBASIC25.82■■□□□ 1.72
HFM1A2PYH4 MED15P5-201ENST00000423150 992 ntBASIC25.82■■□□□ 1.72
HFM1A2PYH4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HFM1A2PYH4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HFM1A2PYH4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HFM1A2PYH4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HFM1A2PYH4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HFM1A2PYH4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HFM1A2PYH4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
HFM1A2PYH4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
HFM1A2PYH4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
HFM1A2PYH4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
HFM1A2PYH4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 AC116353.5-201ENST00000638148 1699 ntBASIC25.81■■□□□ 1.72
HFM1A2PYH4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
HFM1A2PYH4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC25.8■■□□□ 1.72
HFM1A2PYH4 POLD2P1-201ENST00000511220 997 ntBASIC25.8■■□□□ 1.72
HFM1A2PYH4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC25.8■■□□□ 1.72
HFM1A2PYH4 AC027601.4-201ENST00000611259 610 ntBASIC25.8■■□□□ 1.72
HFM1A2PYH4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
HFM1A2PYH4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HFM1A2PYH4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC25.8■■□□□ 1.72
HFM1A2PYH4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
HFM1A2PYH4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HFM1A2PYH4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.8■■□□□ 1.72
HFM1A2PYH4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC25.8■■□□□ 1.72
HFM1A2PYH4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
HFM1A2PYH4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC25.8■■□□□ 1.72
HFM1A2PYH4 AC010654.1-201ENST00000615722 808 ntBASIC25.8■■□□□ 1.72
HFM1A2PYH4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC25.79■■□□□ 1.72
HFM1A2PYH4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC25.79■■□□□ 1.72
HFM1A2PYH4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC25.79■■□□□ 1.72
HFM1A2PYH4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
HFM1A2PYH4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
HFM1A2PYH4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 HS6ST1P1-201ENST00000481504 1234 ntBASIC25.79■■□□□ 1.72
HFM1A2PYH4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC25.79■■□□□ 1.72
HFM1A2PYH4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
HFM1A2PYH4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC25.79■■□□□ 1.72
HFM1A2PYH4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
HFM1A2PYH4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
HFM1A2PYH4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC25.78■■□□□ 1.72
HFM1A2PYH4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
HFM1A2PYH4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
HFM1A2PYH4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
HFM1A2PYH4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
HFM1A2PYH4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
HFM1A2PYH4 HCG4B-203ENST00000450128 991 ntBASIC25.78■■□□□ 1.72
HFM1A2PYH4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC25.78■■□□□ 1.72
HFM1A2PYH4 NMU-202ENST00000505262 693 ntTSL 3 BASIC25.78■■□□□ 1.72
HFM1A2PYH4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC25.78■■□□□ 1.72
HFM1A2PYH4 AC064836.3-201ENST00000607928 673 ntBASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms