Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.05■□□□□ 0.8
SYCE3A1L190 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SYCE3A1L190 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
SYCE3A1L190 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SYCE3A1L190 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SYCE3A1L190 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.04■□□□□ 0.8
SYCE3A1L190 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.04■□□□□ 0.8
SYCE3A1L190 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SYCE3A1L190 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.04■□□□□ 0.8
SYCE3A1L190 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SYCE3A1L190 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SYCE3A1L190 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SYCE3A1L190 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.04■□□□□ 0.8
SYCE3A1L190 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.04■□□□□ 0.8
SYCE3A1L190 AL023803.3-201ENST00000615559 522 ntBASIC20.04■□□□□ 0.8
SYCE3A1L190 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.04■□□□□ 0.8
SYCE3A1L190 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.04■□□□□ 0.8
SYCE3A1L190 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.04■□□□□ 0.8
SYCE3A1L190 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.04■□□□□ 0.8
SYCE3A1L190 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SYCE3A1L190 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SYCE3A1L190 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCE3A1L190 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SYCE3A1L190 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.03■□□□□ 0.8
SYCE3A1L190 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SYCE3A1L190 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.03■□□□□ 0.8
SYCE3A1L190 NUDT16P1-203ENST00000513809 620 ntBASIC20.03■□□□□ 0.8
SYCE3A1L190 RPPH1-201ENST00000516869 333 ntBASIC20.03■□□□□ 0.8
SYCE3A1L190 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SYCE3A1L190 HYMAI-201ENST00000635591 3347 ntBASIC20.03■□□□□ 0.8
SYCE3A1L190 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SYCE3A1L190 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYCE3A1L190 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCE3A1L190 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SYCE3A1L190 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.02■□□□□ 0.8
SYCE3A1L190 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCE3A1L190 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCE3A1L190 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.02■□□□□ 0.8
SYCE3A1L190 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 KRT18P29-201ENST00000397031 1267 ntBASIC20.02■□□□□ 0.8
SYCE3A1L190 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYCE3A1L190 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.02■□□□□ 0.8
SYCE3A1L190 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCE3A1L190 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.02■□□□□ 0.8
SYCE3A1L190 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.02■□□□□ 0.8
SYCE3A1L190 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCE3A1L190 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCE3A1L190 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.02■□□□□ 0.8
SYCE3A1L190 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms