Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 KRT18P67-201ENST00000432816 1264 ntBASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 RNPS1P1-201ENST00000507437 918 ntBASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 AL022326.1-202ENST00000641533 845 ntBASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN16Q9Y5I7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.33■□□□□ 0.21
CLDN16Q9Y5I7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.33■□□□□ 0.21
CLDN16Q9Y5I7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.33■□□□□ 0.21
CLDN16Q9Y5I7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN16Q9Y5I7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN16Q9Y5I7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN16Q9Y5I7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 SCARNA2-201ENST00000458748 420 ntBASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 AL138688.1-201ENST00000624851 1594 ntBASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 AC046185.3-201ENST00000623228 1824 ntBASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN16Q9Y5I7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 AC026396.1-201ENST00000419388 421 ntBASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 MTDHP4-201ENST00000600287 670 ntBASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN16Q9Y5I7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN16Q9Y5I7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms